NONHSAT092829

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT092829

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1470 nt

Genomic location

chr3+:155007815..155011965

Exon number

5

Exons

155007815..155008635,155008729..155008832,155008976..155009080,155011409..155011591,155011709..155011965

Genome context

Sequence
000001 tgtatatgag ccattttgta tttttgctca tgtacctgtg gaaattgcca tattcctaga agagggatag ctaagtcaaa 000080
000081 aattaaatat atatgtaatt ttgatagata tgtactgcca aacatcccgc aaaatgtacc attttgaatt cccaaagaca 000160
000161 atgtatgaga atgcctaatt gcacacagtc ttaccaactc atatgttgtc aaacatcttt atttttttcc catctgataa 000240
000241 gtgagcaaca attcctcagt gtagttttaa ttacatttct ctttttgtga acaagagatt aagtaagtgt acttttacat 000320
000321 tatatgttct ctgaattgtc tgtttttatc tctagcccat tttctttctt tttttttttt tttttttttt tttttgtaga 000400
000401 gatggggtct ctctctgtcg cctaggaagg tctccaattt ctgggctcaa aggatcctca caaagtgctg ggattacagg 000480
000481 catgagccac cttgcacagc cTCAGCCCAC TTTCTCTATA GTTTTTTCCA GAGGGAAGGG GGGATAATTT TTTGTAATGT 000560
000561 GATTAAATTT ATCAAACTTT TTTTAATGAC ATGCATTTTT CATCACAGCT AAACATTTTT CTCACTCAGA ATATAGAGAA 000640
000641 ATTCACTCAT AATTTCTTAT TGTCCTGAAG AAATTCTTAT GCATACCAAA GTGCCAGTTT ATGATCCAAG TTTGTAAAGT 000720
000721 GATGTCAAAC ATTGCATTGT TTAACATGAG ACATTTAATA ATCAGTCATG TTCATAGTTT TCTTAATTCT TCTAAATGAT 000800
000801 GTCAATCTGA TATCTTCTTG CCTTTCTAAG AGAAGACAAC ATAAATCATT ATGATGCAGC CCACAATCCA GCCAATCAGG 000880
000881 AGAAGAATAG GAACCAGAAG GTGTGAAAAT GTAGACCCCG CTTTAagaga atacgtgaga ctgtcataaa ccctgggtat 000960
000961 tttgaatcaa accatgggtc ttttactgtt atgtgacctt tggcaattct gggcttgaac tttcctactg CTTTTTCAGC 001040
001041 CATTATTCCT GTTGGTGGGT GGCTAGGTCA GGCCACGCTT ACCTCTTTCT TTTGTTATCC AGCGTCTCTT TGAACTTTAA 001120
001121 ATAGAGAGAA ATCTGAAGAT TGCGGCAGCT GCCCGTCTCC TGGCTGCCAA TTGTCTGCAG AGTGATGTAA GTCATGGGAA 001200
001201 AGCAGAACTC CTCGGTAACA TGAAGAAAAT GTTCTATAAA GAAGGTGTAC AGAGGAAAAA CAACATTCCA CCTATACAAG 001280
001281 TGCTATCAag gagaagggtg atatattaga aagaaaggat tttgatgttg gagagacttg ggttcaaatt ccagctcttt 001360
001361 ctgtaatgaa agccaagttg cttaacctgg gaatcagctt ctttagtttt aaaatgagga taataatacc tactcatggg 001440
001441 agtcgcataa agatgaaatg aaagtctgta
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Predicted Small Protein

Name NONHSAT092829_smProtein_164:289
Length 42
Molecular weight 4831.7172
Aromaticity 0.146341463415
Instability index 48.1853658537
Isoelectric point 6.49066162109
Runs 8
Runs residual 0.0191530749663
Runs probability 0.0470875287052
Amino acid sequence MRMPNCTQSYQLICCQTSLFFSHLISEQQFLSVVLITFLFL
Secondary structure LLLLLLLLLLEEHHHHHLHHHHHHHLHHHHHHHHHHHHHHL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHL
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTo