NONHSAT093456

From LncRNAWiki
Revision as of 00:47, 17 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT093456

Source

NONCODE4.0

Same with

,

Classification

sense

Length

909 nt

Genomic location

chr3+:180687980..180689604

Exon number

2

Exons

180687980..180688146,180688863..180689604

Genome context

Sequence
000001 ACTTGATAAT ACAGAATCAG ATCAGACTGC AGACACTGAT GCCAGCGAAT CTCATCACAG TACTAACCGT CGTAGGCGGT 000080
000081 CTCGTAGACG AAGGACTGAT GAAGATGCTG TTCTGATGGA TGGAATGACT GAATCTGATA CAGCTTCAGT TAATGAAAAT 000160
000161 GGGCTAGATG ATAGTGAAAA AAAACCCCAG CGACGCAATC GTAGCCGCAG GCGTCGCTTC AGGGGTCAGG CAGAAGATAG 000240
000241 ACAGCCAGGT AACTTGAGTG GACCTGTGGA CACCATCAGG TCACAAGCAT GAAAAAAATG TCTATGTCTG CTTTCTAAAT 000320
000321 ATATTATACT TACATGTACA CATGTGTGCA TATACATTCA AAATTTGCAT TGCATAAATT GTTTATTCAA CTAATAAGAC 000400
000401 TACTACTATT AAGAAAATGC ATTCTTCCTT CACAGTGTGT TAGTAACTTG TCTAATTGAA CTAATGTTGT GTCCTAATTG 000480
000481 TTTACATGGA AATACTGTTG AGAAGACCAT TTTGTTCACT TGGCAGTTTC TTCACACTTG AGATGGGGCC TGCCATCCGA 000560
000561 GGGACTGTGT TGTAGATTGT GATCAAGGTT GATTGGCAAA ACTGGGCAGC TTTTGCATGG TGCCTGCTTA CTATATCTGA 000640
000641 ATTCAGCACC TCATTTTTGT GGGAGTTGTA ATACCCACAA TTAAAAAAAA AGTATAAAAG AGAAAAATAT TTGAAGGTGT 000720
000721 CTTTAACCTA ATGCGAGGAA TGCATGTTGT TTTTGTTTGT TTATTGTAGT GTGATGCCTT TTCCCTTACA CCTACTAACT 000800
000801 ATTCAAATTA ATAATACTTA CTTAGTTTTA GAATGTTTAT TTTATGTAGT CATTAATTTT TAGTAACTTC AAAGAAACTT 000880
000881 GTTTGCTGTG TCTATTATTT TGAACATAA
[back to top]

Predicted Small Protein

Name NONHSAT093456_smProtein_743:862
Length 40
Molecular weight 4672.6761
Aromaticity 0.205128205128
Instability index 47.4874358974
Isoelectric point 5.22198486328
Runs 8
Runs residual 0.0363876319759
Runs probability 0.0665076841547
Amino acid sequence MLFLFVYCSVMPFPLHLLTIQINNTYLVLECLFYVVINF
Secondary structure LEEEEEEELLLLLLLHHHHHHHHLHHHHHHHHEEEEEEL
PRMN LLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo i??????????????????????????????????????