NONHSAT093456
Revision as of 00:47, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT093456 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
909 nt |
Genomic location |
chr3+:180687980..180689604 |
Exon number |
2 |
Exons |
180687980..180688146,180688863..180689604 |
Genome context |
|
Sequence |
000001 ACTTGATAAT ACAGAATCAG ATCAGACTGC AGACACTGAT GCCAGCGAAT CTCATCACAG TACTAACCGT CGTAGGCGGT 000080
000081 CTCGTAGACG AAGGACTGAT GAAGATGCTG TTCTGATGGA TGGAATGACT GAATCTGATA CAGCTTCAGT TAATGAAAAT 000160 000161 GGGCTAGATG ATAGTGAAAA AAAACCCCAG CGACGCAATC GTAGCCGCAG GCGTCGCTTC AGGGGTCAGG CAGAAGATAG 000240 000241 ACAGCCAGGT AACTTGAGTG GACCTGTGGA CACCATCAGG TCACAAGCAT GAAAAAAATG TCTATGTCTG CTTTCTAAAT 000320 000321 ATATTATACT TACATGTACA CATGTGTGCA TATACATTCA AAATTTGCAT TGCATAAATT GTTTATTCAA CTAATAAGAC 000400 000401 TACTACTATT AAGAAAATGC ATTCTTCCTT CACAGTGTGT TAGTAACTTG TCTAATTGAA CTAATGTTGT GTCCTAATTG 000480 000481 TTTACATGGA AATACTGTTG AGAAGACCAT TTTGTTCACT TGGCAGTTTC TTCACACTTG AGATGGGGCC TGCCATCCGA 000560 000561 GGGACTGTGT TGTAGATTGT GATCAAGGTT GATTGGCAAA ACTGGGCAGC TTTTGCATGG TGCCTGCTTA CTATATCTGA 000640 000641 ATTCAGCACC TCATTTTTGT GGGAGTTGTA ATACCCACAA TTAAAAAAAA AGTATAAAAG AGAAAAATAT TTGAAGGTGT 000720 000721 CTTTAACCTA ATGCGAGGAA TGCATGTTGT TTTTGTTTGT TTATTGTAGT GTGATGCCTT TTCCCTTACA CCTACTAACT 000800 000801 ATTCAAATTA ATAATACTTA CTTAGTTTTA GAATGTTTAT TTTATGTAGT CATTAATTTT TAGTAACTTC AAAGAAACTT 000880 000881 GTTTGCTGTG TCTATTATTT TGAACATAA |
Predicted Small Protein
Name | NONHSAT093456_smProtein_743:862 |
Length | 40 |
Molecular weight | 4672.6761 |
Aromaticity | 0.205128205128 |
Instability index | 47.4874358974 |
Isoelectric point | 5.22198486328 |
Runs | 8 |
Runs residual | 0.0363876319759 |
Runs probability | 0.0665076841547 |
Amino acid sequence | MLFLFVYCSVMPFPLHLLTIQINNTYLVLECLFYVVINF |
Secondary structure | LEEEEEEELLLLLLLHHHHHHHHLHHHHHHHHEEEEEEL |
PRMN | LLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | i?????????????????????????????????????? |