NONHSAT094018

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT094018

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3660 nt

Genomic location

chr3+:193409183..193415315

Exon number

2

Exons

193409183..193409921,193412395..193415315

Genome context

Sequence
000001 TAATGTAAAT CTACCTCTAG TGGCTCTGGT ATTTTTAAAC TTATTTATAG CTGGCAAAGT ACTTTTTTGT ATGTATTTTT 000080
000081 ATAGCACCAT TGCACTTCTC atgtttgttg caagcatctc ccacagcttc ctttgtcttt taattttatg acatataaat 000160
000161 aaaagtatac atttcaatat ggccatattg attgatcttt tcctttgtaa ctcttactac tttatattta aaaagtcatt 000240
000241 tcccagtcta aggccacctc tattttcttt tagtttttta aaatggtttc attgttttat atttgcctat gatccaGACA 000320
000321 TTAGtaactg tgggttctta attgggcttc agagaatctg agaattcctt aaaattctct acataattgt acatgtactt 000400
000401 aatacatgct tttttccatg ttaagagtcc agagtttttg ttagatcctc aaaggggtca gtCAGTCTCT CCTCCCACTT 000480
000481 CCAAAAAATG TCTGAGACCT ACTACTATAA TCCATCTGGA CTTTATTTGG GTAAAAGGTG GTATGGTGAG ACTCATATTT 000560
000561 TTCTTTTTCC CGCAAATAGT TAAGTATACC AACCATTTAG TAAATAATTA CCTCCTGATT TGTGATACCT TTGAAAAATA 000640
000641 AATGTTTTTC TTTATTTTTA TCTCCACAGA GAAAGTTAGA GAAATTCAAG AAAAACTTGA TGCTTTCATT GAAGCTCTTC 000720
000721 ATCAGGAGAA ATAAATTAAA ATCGTACTCA TAATCAGCTC TGCATACATC TGAAGAACAA AAACATCAAC GTCTTTTGTC 000800
000801 CAGCCTCTTT TTCTTCTGCT GTTCCACCTT TCTAAACATA CAATAAAGTC ATGGGATAAA AATAATCGAT GTATGTTACG 000880
000881 GGCGCTTTAA CCATCAGCTG CCTCTCGAAT GGAAGAACAG TGGTAATGGA TTAACATCCT ATTTTGTTGT ACTAAAGTGA 000960
000961 CAAATCGGAA TAATATAATT GGTATGGCCA TTAGGTTCAG TCCTTGAAGA TAAGAAACTT GTTCTCTGTT TGTTGTCTTA 001040
001041 TTTGTGGTGG CACTCGTTTA ATGGATTAAC TGAGGTTGCT CAATGTTCAG TTTCTTTTCC AGAAATACAA TGCTAGGTGT 001120
001121 TTTGAAATAA AACTTATATA GCAATTGTTT AAAGTTATCA ATTGTATATA AAATCACAGT AGCCTGCTAA ATCATTGTAT 001200
001201 GTGTCTGTAG TATTCTATTC CCAGAAACTA TTTGACCATG ATAATTCAGT TTATATTCAC CACATGAAAG AAAAATGGGT 001280
001281 AACAGAAGAA CCCTTAAAAC AGGTTAATTT GGATTGTAAC GTTCAGTGAA AGAAATTTCA ACCCTTCATA GCCAGCGAAG 001360
001361 AAATTTGCCT TGGAAGCCAA GTCAGTACCA GCTTACCTAT TTGATTCAGT TGCTGTTTTC TCACTCTCTA TATCCATTTG 001440
001441 AAATTGATTT ATTTTAGATG TTGTATACTT ACGTTAGGCT TTCTGTTAAT AGTGGTTTTT CTCCTGTTGA CAGAGCCACC 001520
001521 GGATTATGAC ACAGGATGAG GAAGATTAAG GATAATCAAT TGACTAATTT CATTTAGAAT ATTATCAAAC ATTTCAACTA 001600
001601 GGTATCAGAA AAAGGCTTTC TTTCATAAGA CTATTTTAAA TAGAAATTAT TTCAACAATT AAAGTAATGT TGACCATCCC 001680
001681 CCTCTCAGCT GAATAAAGAA AAATTTAGTT CAATTTATTG CAATTTAATT ACAATACTAC CTTCACAACA TTTTCATGTG 001760
001761 ttttaaataa atatttttta attGGCTAAA GGACATTCAA GCAAAGAAAT GCTTTCTTTA CTTAAAATGT CTATCTCATT 001840
001841 TGCTGCCTTT TCACTAAGCC TTTACTTTGT TAATAAAAGT GTCCATTGTG TGATGTTTTT GATTTTACAG TTTGCTAAAT 001920
001921 CTTATTTTCT TGGAGTTGCT TTTTGGTAAC AGCCCCATTG CTACTCCCCA TTTTATTGTT TTACATCAAT GCATGCTTCG 002000
002001 TTGTGATCCC TCAAGATGTA ACACTTGGTA TGCTCGGTTG AGGATATGAA AAAATACTTC CGAAACCAGG AATTCAATGT 002080
002081 ATGTTTGTTT TATACTGTTT GATAAGAAAA GTAGGTCCAG CCTTAAGCAG CACAGATGCG CTGGTAGATG CATAGTCAGG 002160
002161 AACTTTTTTT ATTTCTTTTA GGTCTAGGGA CAGGAGTGAA TAGAAAGGGA GGAGAGCTCT ATTATGTTCT ATACACAGAT 002240
002241 TAGGAGATGA CCTTACTGGG TACACCCCTC TAACCAGTGC TTACAGGTTA ATGCATGTTA ATGAATATTT TTGCAGTTGT 002320
002321 AAAGCATAAC AATTACAACT ACACATCTAT TTCTAAAGAA TAAAACAGGA CCATATTTAT TTACTTCTGT CAACTATAGA 002400
002401 AAGAAAGACC TTCAGCTGTA TTTCCACAGA TTTCTCCCAA GGAAAAGGCT AATATTAGTC ACTACTGTTA TCACATCCCT 002480
002481 TTGTATAAGT TTTAAAAAGA GATGGAGGGA GATCTTCATT TCTTTGAGGA GATCAGTATT GTAACGTATG TGAATAGATG 002560
002561 ATAACAATTA ATATTACTAA AAGTCCCACA TGAGAGTCCT GACGCCCTCT CCATGCCCCA CAGTAATGTG GCTTCTTTCA 002640
002641 TGGGTTTTTT TTTCTTCTTT TTAGCTGATC TCATCCTAAG CATGCTTTAT TTTTCCTTGA AAGCTAGGTA TTTATCAACT 002720
002721 GCAGATGTTA TTGAAAGAAA ATAAAATTCA GTCTCAAGAG TAAACCCTGT GTCTTGTGTC TGTAGTTCAA AAGTCAGAAA 002800
002801 TGATTCTAAT TTAAACAAAA AGATACTAAA TATACAGAAG TTAAATTCGA ACTAGCCACA GAATCATTTG TTTTTATGTC 002880
002881 AGAATTTGCA AAGAGTGGAG TGGACAAAGC TCTGTATGGA AGACTGAACA ACTGTAAATA GATGATATCC AAACTTAATT 002960
002961 TGGCTAGGAC TTCAATTTTA AAAATCAGTG TACCTAGGCA GTGCACAGCA CGAAATAAGT GGCCCTTGCA GCTTCCCCGT 003040
003041 TTAACCCACT GTGCTATAGT TGCGGGTGGA ACAGTCAACC TTTCTAGTAG TTTATGATAT TGCCCTCTTT GTATTCCCAT 003120
003121 TTTCTACAGT TTTTTCCGCA GACTTCTTTC TGCAAATTAT TCAGCCTCCA AATGCAAATG AATGATATAA AAATAAGTAG 003200
003201 GGAACATGGC AGAGAGTGGT GCTTCCCAGC CTCACAATGT GGGAATTTGA CATAGGATGA GAGTCAGAGT ATAGGTTTAA 003280
003281 AAGATAAAAT CTTTAGTTAA TAATTTTGTA TTTATTTATT CTAGATGTAT GTATCTGAGG AAAGAAATCT GGTATTTTTG 003360
003361 CTTTCCAATA AAGGGGATCA AAGTAATGGT TTTTCTCTCA GTTCTCTAAG CTGGTCTATG TTATAGCTCT AGCAGTATGG 003440
003441 AAATGTGCTT TAAAATATGC TTACCTTTTG AATGATCATG GCTATATGTT GTTGAGATAT TTGAAACTTA CCTTGTTTTC 003520
003521 ACTTGTGCAC TGTGAATGAA CTTTGTATTA TTTTTTTAAA ACCTTCACAT TACGTGTAGA TATTATTGCA ACTTATATTT 003600
003601 TGCCTGAGCT TGATCAAAGG TCATTTGTGT AGATGAGTAA TTAAAAAATA TTTAAATCAC
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Predicted Small Protein

Name NONHSAT094018_smProtein_392:640
Length 83
Molecular weight 9687.3798
Aromaticity 0.158536585366
Instability index 44.9548780488
Isoelectric point 9.34283447266
Runs 13
Runs residual 0.0226348854398
Runs probability 0.0609432962375
Amino acid sequence MYLIHAFFHVKSPEFLLDPQRGQSVSPPTSKKCLRPTTIIHLDFIWVKGGMVRLIFFFFP
QIVKYTNHLVNNYLLICDTFEK
Secondary structure LEEEEEEEEELLLLEELLLLLLLLLLLLLLLLLLLLLEEEEEEEEEELLLLEEEEEEELH
HHHHHHHHHHLLEEEEELLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
HHHHLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTT
TTTToooooooooooooooooo