NONHSAT094045
Revision as of 00:49, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094045 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
698 nt |
Genomic location |
chr3-:193761142..193767131 |
Exon number |
3 |
Exons |
193761142..193761297,193761533..193761644,193766702..193767131 |
Genome context |
|
Sequence |
000001 gcctatgatc tacagtgccc attccaactc agagaatctT TACATCTGGA GATCTATAGC AGGGCTATCC CTAGTGACAT 000080
000081 GCGTGAAGAA GCTTGGAAAT GGTGCTGGGT AGGAGCTGAG TGTGCAGAAT GTGGAAAGGC ATTCTAAACC AAAGGAAGAA 000160 000161 CACGAGTAAA GATGATGAAG CAGGGATAAG GCTAAAATGA AATTTGTGAT CTGATCCACA TACAAGCACA GTGTAGTACA 000240 000241 GCTGGAATAT AGAGAAGAGC TTGAAGACTT ATGAGCAACT ATCCCGGTAC TCTTGGAGGC TCTGCAACCA CAGTTTGAGA 000320 000321 AACTCCGCGT TCAAAGTTAA AAACTGTCAC CTGAATAGTT AATAACATCA AAGATTGTGA AAGCAAGTAT AAATAACACA 000400 000401 GAGATTAAAA TAATGAGGCA GGATCAGAAA ATGTCCATTG CAATCAGAAG CTCACCGAAT GTGCTTAGCT GAGTGGAGAA 000480 000481 TGATTTCTCG GTGTTGTATT TGCTCTGAAG AGTCTGAATT CTTGGGGAGG CAGAAGCTGG AAAAAACAAG AAGGAAGATC 000560 000561 TCCCATAGAT TTTCAAGGTG CTGAGAAAAC AGCTTCTAGA CATATCTCGA AAGCCAAGTT TCTGAGATGT AATCAGAAAG 000640 000641 Ctgtagtgga aggaaatttg aaccagaaga ctgcagtcct gtctatgaac gttaaacc |
Predicted Small Protein
Name | NONHSAT094045_smProtein_458:583 |
Length | 42 |
Molecular weight | 5008.8998 |
Aromaticity | 0.0731707317073 |
Instability index | 56.7536585366 |
Isoelectric point | 9.34552001953 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0412078745413 |
Amino acid sequence | MCLAEWRMISRCCICSEESEFLGRQKLEKTRRKISHRFSRC |
Secondary structure | LLHHHHHHHHLLEELLLHHHHHLHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |