NONHSAT094198

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT094198

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2051 nt

Genomic location

chr3+:195427634..195436459

Exon number

3

Exons

195427634..195428540,195435005..195435306,195435618..195436459

Genome context

Sequence
000001 aaaagaatca ccaaaataaa aaatagtaac aatactattg tcaaggatgc aaaggaactg taccactcaa tcactgctgt 000080
000081 gagaatttaa agtggtgcag ccactctggg aaacagcttg gctgtttttt tttatgactg aatgtgcaac tactatatga 000160
000161 tgcagtaatt tcatttttgc acatttatcc cggagaaatg aaaacatata ttcacacaaa acctgtatat gaatgctaat 000240
000241 aAAAGTCAAT Tggccaggtg tggtggctca tgcctgtaat cccagcactt tgggaggctg aggcagtgga tcacctgagg 000320
000321 tcaggagttt gagaccagcc tggccaacgt ggtgaaaact cgtctctact aaaaatacag caattagctg ggtgtaatag 000400
000401 tagccacctg taatcccagc tactggggag gctgaagcag aagaacctct tgaacccggg aggcagaggt tgcagtgagc 000480
000481 tgagatcgta ccactgcact ccagcctggg cgatagagtg agactctgtc tcaaaaaata aaataaaata aataaaaaga 000560
000561 ttagataatc tgcaaagttc ctgtgagcgc tgtcattttg tcactctGGT TTTTCAGATT CTTCCCCTGG AGGCTGGAGT 000640
000641 TTCCAGGATG TCAAAATTAC CTCTGCTTGG GTGAGCTATT TCAAGCAGCT GGGATACCTG TGTCACTCCT GCTGTCTGCC 000720
000721 AGTGACTGCC CAGGTGTCTG CTGGTTCCTC CCCAGGAGTA GGGAGGAACC AGGTGGGCTG GCTGGGATGG GTGGATATTT 000800
000801 AAAGACCAGG CCTTGGACGC TGCAGCACTT CTATCTCTGC TTGATGCCTG CTGCCACGTG GCTGGTCCTC CTCCTCCTGC 000880
000881 TGTGGCTGAG CCTTGGGGTG AAGACAGGCA GCTGCTCCCA ACCCCAGAAC CTTTGCTGTC TTGGGACGGA TCACCGCTGC 000960
000961 AAGAGGGGAA GTTGCTACTG TGATGAATTC TGCCATGTGG CACCAGACTG CCACCCAGAC CACAGTGTCC TCTGCAACCC 001040
001041 TGGTAACTCA CATACAGGCC CGATTCCACC TACAGCAAAG CTGGATGCGA TGGCTGGCAG AGGCAAACCC TTTGCCTGCA 001120
001121 CTTCAGGCCA AAGCCGggat gtggcctaga tggttcctaa ggtccctgac aatcctgaga tcttgCATCT TGTCTATTTC 001200
001201 AGGTCAAAGC TTCTCAGATG ACCAAGATGG TGCTGCAGAT GGTGCTGAGG ATGGAGAACC CACCAAGCCC CGCTAGGAGC 001280
001281 CACCTAGACT GGATGCAGAG CATGGTGAGC TCCCTGCAGG TTCTCTGAGA AGGGGTGGAT GGCAGCCTGC TCCTTGCCTT 001360
001361 TGTGCCCTCC AGGCCCCAAA GTCAGGGAAC CAAAAGAAGA AAGGGGCCGT AGCTAGGGCA GAGCTCCACT GCAATGATTG 001440
001441 TTTTAGGGGT AGGAGCCAGG ATTGCCGtct gtggacactg aaatttgaat ctcatatact tttgtgacaa aacattcttc 001520
001521 ctcttttgtt cttctcctac catctaaaaa tgtagaaaac attcttagcc tatgagttgc acaaaaacag gcagtggcca 001600
001601 gatttggccc atagaccata gtttgctgac ttctgCCCTA AATCATCCTC CATTTCTTTC CTTCTGTGTC CTtgttactg 001680
001681 acaaagccac tttccctaaa atggggtctt tccctgtttg gtgccatgaa gccaatatgc aaaaccgaaa gtgagcctca 001760
001761 agcagtgcag gctttatttg gtggccatgg aattgagaag tgagagcttg gctcacaaat caacttttct gctcgtgaga 001840
001841 cccaggaagt cacagataca gggcatcttt agtgaagggg ctgagcatta aaagcaaggg gaggagtggc caggtgcaat 001920
001921 ggctcactcc cataaaccca gaactttggg aggccaaaat gagaggattg ctgagaccag gagttcgaga ccatcctggt 002000
002001 caacatagtg atacaccccc atctctacaa aaataaaaat gaaaaaagca a
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Predicted Small Protein

Name NONHSAT094198_smProtein_1571:1753
Length 61
Molecular weight 6707.7379
Aromaticity 0.1
Instability index 49.7583333333
Isoelectric point 8.61309814453
Runs 11
Runs residual 0.0335992907801
Runs probability 0.035530182589
Amino acid sequence MSCTKTGSGQIWPIDHSLLTSALNHPPFLSFCVLVTDKATFPKMGSFPVWCHEANMQNRK
Secondary structure LLEELLLLLEEELLLLHHHHLLLLLLLLEEEEEEEELLLLLLLLLLLLEELLLLLLLLLL
PRMN -
PiMo -