NONHSAT095073
Revision as of 00:53, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095073 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1168 nt |
Genomic location |
chr4-:8009112..8012455 |
Exon number |
3 |
Exons |
8009112..8009927,8010777..8010829,8012157..8012455 |
Genome context |
|
Sequence |
000001 GAGCAGGCTT GGCGTTGATT TGCCTCTGTG AGTGGGGAGA GCAGGGCTTT GTATTTTCAC GCTGAAAATC ACTGTCTCTC 000080
000081 CTGGAAGAAG GAGAAACAGG TAGCCGTTGA GAGTAACGAG ATGTTAGTGT ATTCGGAACG GAACTGCTCA GTCTTCAATT 000160 000161 TTGGCCTTAT CTTGTCAAGG TCCTGTAGCC CAATCCCAAA TTTCCAAGCT CTCTGGCCTG GTATCAGTCT TGTCCTTGGT 000240 000241 GGTGCAGGAG GCAGGGTACG GCAAAAGACA GACGGGCCCG AGCCCGCCGC CCGCTGCAGC TGCCAGGCGA TCGGATGGGG 000320 000321 AGGATGGAAG CTTGGACCAG GATAACAGGA AGCAGAAGAG CAGCTGGCTG ATGCTCAAGG GGGATGCAGA CACAAGGACC 000400 000401 AATTCTCCAG ACCTGGACAC CCAGTCCTTG TCCCACAGCA GCGGGACCGA CAGAGACCCT CTCCAAAGGA TGGCAGGGGA 000480 000481 CAGCTTTCAC TCACGTGAGT GGTTCTTTTG AAGAAGGAGC CGTGATGTGC ACAAAATGCC TCGCGGCAAA GAGGCCCCAG 000560 000561 AACTCAGAGC TATCCCCCTA CATCTAAGCC TTGCCTGTTA AAAAGCATGA AAGCAAAGCC CACAAATCTA AGGACCGACC 000640 000641 GGAAGGAAAT ATGGGGCTTT TGCAGTTTGC CGGCTTCCCA AGAACTGTCC CCGAGCCAGT GTGCTAACGA GGGCCACGCC 000720 000721 TGCATGTCCC CTCACAGATT TCCAAGGTGT GCAAGAATGC AGAAACCCAG ACCTGCTCCT GGGCTGTTTA GGAGAAAGGC 000800 000801 GTCCGGGCTG CCGGGTGGAA GTCAGGGCCT GTTCCCTCCA GAGCAGACAT GGGCATGGTC CGGCTGATGA GTGCAGACTT 000880 000881 GGAGTTGGTG ATGGGCACCA TCCCTGTCCC CTGTGACTCA TCCTGAACGA GGCACAGCCT CAGGCTTCAT AGAGAGACAG 000960 000961 TGATGGTGTC TGCCTGACCC TAGGGGTGTT TTGAAGACTG AATCAGGAGT GATTTTCAAA TGTAGAGAAA ACTCCAGATA 001040 001041 ATGCTGTTTG CTTCCGGCCG CTGTAAATCA TAGGTGAAAA CCAGTAGCAA GTGCTCACTC AGTGCCTCCC AGAAGCGGTC 001120 001121 TGCGGGTCTC AGCTGGGCTG GGGGCAGTTT TCATTGGGCA AGGCTTGG |
Predicted Small Protein
Name | NONHSAT095073_smProtein_383:586 |
Length | 68 |
Molecular weight | 7127.0112 |
Aromaticity | 0.0746268656716 |
Instability index | 55.6044776119 |
Isoelectric point | 6.51861572266 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0473709003122 |
Amino acid sequence | MQTQGPILQTWTPSPCPTAAGPTETLSKGWQGTAFTHVSGSFEEGAVMCTKCLAAKRPQN SELSPYI |
Secondary structure | LLLLLLEEELLLLLLLLLLLLLLLLLLLLLEEEEEEEELLLLLHHHEEEHHHHHLLLLLL LLLLLLL |
PRMN | - |
PiMo | - |