NONHSAT095073

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT095073

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1168 nt

Genomic location

chr4-:8009112..8012455

Exon number

3

Exons

8009112..8009927,8010777..8010829,8012157..8012455

Genome context

Sequence
000001 GAGCAGGCTT GGCGTTGATT TGCCTCTGTG AGTGGGGAGA GCAGGGCTTT GTATTTTCAC GCTGAAAATC ACTGTCTCTC 000080
000081 CTGGAAGAAG GAGAAACAGG TAGCCGTTGA GAGTAACGAG ATGTTAGTGT ATTCGGAACG GAACTGCTCA GTCTTCAATT 000160
000161 TTGGCCTTAT CTTGTCAAGG TCCTGTAGCC CAATCCCAAA TTTCCAAGCT CTCTGGCCTG GTATCAGTCT TGTCCTTGGT 000240
000241 GGTGCAGGAG GCAGGGTACG GCAAAAGACA GACGGGCCCG AGCCCGCCGC CCGCTGCAGC TGCCAGGCGA TCGGATGGGG 000320
000321 AGGATGGAAG CTTGGACCAG GATAACAGGA AGCAGAAGAG CAGCTGGCTG ATGCTCAAGG GGGATGCAGA CACAAGGACC 000400
000401 AATTCTCCAG ACCTGGACAC CCAGTCCTTG TCCCACAGCA GCGGGACCGA CAGAGACCCT CTCCAAAGGA TGGCAGGGGA 000480
000481 CAGCTTTCAC TCACGTGAGT GGTTCTTTTG AAGAAGGAGC CGTGATGTGC ACAAAATGCC TCGCGGCAAA GAGGCCCCAG 000560
000561 AACTCAGAGC TATCCCCCTA CATCTAAGCC TTGCCTGTTA AAAAGCATGA AAGCAAAGCC CACAAATCTA AGGACCGACC 000640
000641 GGAAGGAAAT ATGGGGCTTT TGCAGTTTGC CGGCTTCCCA AGAACTGTCC CCGAGCCAGT GTGCTAACGA GGGCCACGCC 000720
000721 TGCATGTCCC CTCACAGATT TCCAAGGTGT GCAAGAATGC AGAAACCCAG ACCTGCTCCT GGGCTGTTTA GGAGAAAGGC 000800
000801 GTCCGGGCTG CCGGGTGGAA GTCAGGGCCT GTTCCCTCCA GAGCAGACAT GGGCATGGTC CGGCTGATGA GTGCAGACTT 000880
000881 GGAGTTGGTG ATGGGCACCA TCCCTGTCCC CTGTGACTCA TCCTGAACGA GGCACAGCCT CAGGCTTCAT AGAGAGACAG 000960
000961 TGATGGTGTC TGCCTGACCC TAGGGGTGTT TTGAAGACTG AATCAGGAGT GATTTTCAAA TGTAGAGAAA ACTCCAGATA 001040
001041 ATGCTGTTTG CTTCCGGCCG CTGTAAATCA TAGGTGAAAA CCAGTAGCAA GTGCTCACTC AGTGCCTCCC AGAAGCGGTC 001120
001121 TGCGGGTCTC AGCTGGGCTG GGGGCAGTTT TCATTGGGCA AGGCTTGG
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Predicted Small Protein

Name NONHSAT095073_smProtein_383:586
Length 68
Molecular weight 7127.0112
Aromaticity 0.0746268656716
Instability index 55.6044776119
Isoelectric point 6.51861572266
Runs 9
Runs residual 0.00898648120653
Runs probability 0.0473709003122
Amino acid sequence MQTQGPILQTWTPSPCPTAAGPTETLSKGWQGTAFTHVSGSFEEGAVMCTKCLAAKRPQN
SELSPYI
Secondary structure LLLLLLEEELLLLLLLLLLLLLLLLLLLLLEEEEEEEELLLLLHHHEEEHHHHHLLLLLL
LLLLLLL
PRMN -
PiMo -