NONHSAT095150
Revision as of 00:54, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095150 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
567 nt |
Genomic location |
chr4-:9997293..10020699 |
Exon number |
3 |
Exons |
9997293..9997597,9998405..9998565,10020599..10020699 |
Genome context |
|
Sequence |
000001 AGGACTGGTC CTGCTCGCTC CTCGTGGCCT CCCTCGCGGG CGCCTTCGGC TCCTCCTTCC TCTACGGCTA CAACCTGTCG 000080
000081 GTGGTGAATG CCCCCACCCC GTACATCAAG GCCTTTTACA ATGAGTCATG GGAAAGAAGG CATGGACGTC CAATAGACCC 000160 000161 AGACACTCTG ACTTTGCTCT GGTCTGTGAC TGTGTCCATA TTCGCCATCG GTGGACTTGT GGGGACGTTA ATTGTGAAGA 000240 000241 TGATTGGAAA GGTTCTTGGG AGCATCCTGG GAGCCAGTGA GCAGTGTGTG GAAAGAGTAG AGCTTCTCCA AGTGATGGAG 000320 000321 GAGTCGTCAC ATCAATCTGA tggggccaga acattcgtgt cttaacttga atcatgtgtc ttccacttac tagctgtgtg 000400 000401 cccttggcca aatcatttaa tttatttgag cctcaatttt cttatctgta aaatagggat gatagtttct acctgcaggg 000480 000481 aatgttacaa gagttagacc aaatgaatgG AAGGAGAATG GCCATGAGTT GTAGCTGAAT AAATAAAAAT TCTTGTCATT 000560 000561 GACCACA |
Predicted Small Protein
Name | NONHSAT095150_smProtein_239:364 |
Length | 42 |
Molecular weight | 4421.9813 |
Aromaticity | 0.0243902439024 |
Instability index | 49.0731707317 |
Isoelectric point | 4.69805908203 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0258157316981 |
Amino acid sequence | MIGKVLGSILGASEQCVERVELLQVMEESSHQSDGARTFVS |
Secondary structure | LLHHHHHHHHLLLHHHHHHHHHHHHHHHLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |