NONHSAT095569

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT095569

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1909 nt

Genomic location

chr4-:13187223..13339269

Exon number

10

Exons

13187223..13187359,13192904..13193109,13223015..13223058,13239166..13239506,13246440..13246459,13251292..13251519,13297496..13298140,13338311..13338332,13338764..13338784,13339024..13339269

Genome context

Sequence
000001 ATGTTCAGGG GAAATCCTCA GAGTCAACCA CACCACGGAT AAAGTTGAGA CACTCTGGTA TCAACTCAAC ACAGCTGTCC 000080
000081 CTGATGAACA CACGATGGAC ATAGAGTTTG ATGTTGTTCT TTTTCTTCTT GTTCTCAAAA AGATGAAAGG GAGCCTAAGG 000160
000161 AGGAATGAAT AGCAATGCCC TGAATTCCAA CTGACCTTCT ACAGAAAAGT ACCTGACTGC CAAGTGGTCT TTCCAGTCAT 000240
000241 TGGTGACCAT CACTAATTTC TTTCTCTATG ATGTCAATTT TCAGCTCTTC AGCTACTCAG TAGGCCGAGG TTGGGAGGAT 000320
000321 CTCTTAAGCC CAGGAGGTTG AGGCTGCAGT GAGCTATGAA CATGCCACTA TCCTGCAGCC TGGGCAACAG AGCAAGATCC 000400
000401 TGTCTCAAAA AAAAAATTAA GGTCAAGAGG AAAAGTTACC AAATTTCTCT GAGCCTTAAC TTTCCTATCT GTAAGATGGT 000480
000481 TATAATAATG CCTGTTCTTC CTACTACATG TGGGATAAGT GACAATAAAA TGTTATTGTG AAAGTGCTTT AGAATATATA 000560
000561 AATATATGGG GGGAGAGAGA AGAGACATCC ACACACACAC AAGCACATTT AAAAAGACTT TATGCAAAAG TACGGCTTTG 000640
000641 TTAATGATTT GATTTTGATT TGTTAATTTT GATTTTGATT TGTTGATTTG TTAATGATTT GATTTTGATT TGTTAATTAA 000720
000721 TTAACCACAG ATTTATTGAG CACCTGTCAG TTACTATTTC AGTGCTGGCC ATAAGTGGAG AACAAGAGAG ACATGGTGGC 000800
000801 TGCCTTCCTG AGCTGATAAT CTGAACGAGG TGGAGCTGGA TGGCAGAGGG AGAGACAAAG AGGACAAATA TACAACAGAT 000880
000881 AAACAAGAGA ACGTTGGAAA GTGCTGAATG CACTGAAGAA GTTAAGTAGG GTGTTAATGA GACTATGCAG AATTGATATG 000960
000961 GAATTGCACG TATATGTATG GCTGGGCTAA GATTTGCAAG GGCAGAGGGG AGATTTAGGG CCAAATCAAG CAGGCCTTGT 001040
001041 ATACTCTGCC ATGACCAGGA TTGGGCTTTA TTCTGGAGAT AATGTGAATC TATGGAAGGA CTTACATAAG AAAAGATGAA 001120
001121 GTCAGTTTTA TGTTTCAAAA TGATCAATGT GTCTGGGGTG GTCCTGCTAA TGTAGTCCAG GGGCCTCCCA AAGTGCTCTG 001200
001201 GGATTACAGG TGTGAGCCAC TGTGCCCGGC CTGTTAAATC GTTTTTCTAA GGTAACATAG CTGATGAGGT ACAGCCAGTA 001280
001281 TGACTCCAGA GAGCACACTC GTAACTAGTG CACAAAAATG TCTTGGTTTG TTTGAACATT GATTGAAAAA CACAACATCA 001360
001361 GGGCATCTGT GGGGTATACT TCCTGGAATG TGTTTCAAGG GAGCCCTGGA AACAGCGAAT GTTCATAAGG CAGAGAAATG 001440
001441 CCTGGCTGTG TGGGGTAGTT AGAAGCATCC AGGGTCTAGC ACATGAATAT TTGAAGGTTA TGCTAGGGAA GGGCTGAGGC 001520
001521 TATTACACAG TTAACTACAT AAAGACCAGT TACTACTGAT TCCGCTATTG ATCCTTAAGT CAACAAAATG TGTGTGTATA 001600
001601 TACGTATGTG TGTATATCTT TAAGTCAACT AAATGTGTGT GTGTTTGTGT GTGTGTGTGT CTGTGGGGTG TGAAATCGTG 001680
001681 TCAAAAAAGA ATGGGAGGCA ATGGTAGGAG AGCTACAGCT GATTGTTCAG CAGTAGCCAC TTTTCTTCCC TTCCCATCAT 001760
001761 GAATAGAATA TACCACATGC CCATCAATGA TAGACTGGAT AAAGAAAATG TGGCATATAT ACACTGTGGA ATACTATACA 001840
001841 GCGATAAAAA AGGATGAGTT CATGTCCTTT GCAGGGACAT GGATGAAGCT GGAAACTATC ATTCTCAGC
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Predicted Small Protein

Name NONHSAT095569_smProtein_977:1081
Length 35
Molecular weight 4052.6744
Aromaticity 0.147058823529
Instability index 50.2735294118
Isoelectric point 10.6204223633
Runs 7
Runs residual 0.0197319434103
Runs probability 0.0458021046257
Amino acid sequence MAGLRFARAEGRFRAKSSRPCILCHDQDWALFWR
Secondary structure LLHHHHHHHHLLLLLLLLLLLEELLLLHHHHHLL
PRMN -
PiMo -