NONHSAT095643
Revision as of 00:54, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095643 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
958 nt |
Genomic location |
chr4+:15683484..15690595 |
Exon number |
4 |
Exons |
15683484..15683644,15687859..15688085,15688624..15688771,15690174..15690595 |
Genome context |
|
Sequence |
000001 GCAGCGCTGG GCCCGGCCGG GTCGCTGCGG CTGGGCTGGA GGTGAGGCGA AAGAAGGGCA TCCTCTGATG GGAGTGGACC 000080
000081 GGAGTCCGCT AAAGCGAAGC ATTCCAGGGT TCGTTGCGGG AAATACAGTC TGGTTTTGCC CCCCGTATGA ATTGAGGGAA 000160 000161 GGTCAAGGAT GCATTCCAGG AAAGTTCTAT AAAAATATAC CATCAACTCC AACCTGATAT TTGACCTAGC CATGGAAAAC 000240 000241 CTCATTGGCT CCTCACTGGA TCAGACCATA AAAATGATCC AGGAATGAAA ATCTAAGATA AATTCCCACC ACTTCAAGAT 000320 000321 GTTCTTATAC AAGTCAACAG TCTAGCAGAT CAGCCAGTCT CTTTCATCAT CAAGCAGACA TACTCAAGaa agaggaatag 000400 000401 tgaagtgaaa tatacagaag catgttcaag ttcatctgtt gaatctggaa ttgtgaatag tgacaatatt gagaaaaata 000480 000481 ctgactccaa tctgcaaact tcaacttcat ttgagccaca tttcaaaaag aaaaaaaaga aaaatttgaa acattaaggg 000560 000561 aaaacagttg ggtaaaagat ccatttgctt ttcgacaccc tgaatcaata attgagctaa acttggtgcc tgaagaagag 000640 000641 aatgaattat tgcagcttag ttcttcatat acattgaaga atgattatga aaccttaagt ttatcagcat tttggatgaa 000720 000721 ggtaaaggaa gactttccat tgttaagtag aaagagtgtc ctgctattgc taccattcac aacaactagt ttgtgtgaac 000800 000801 tagggttttc catcttaacg cagttaaaaa caaaggaaag aaatgggctg aattgtgcag cagttatgcg ggtagcatta 000880 000881 tcttcctgtg ttccagactg gaatgaactt atgaacaggc aagcacaccc atcatagtaa ataaaaatct tacctagc |
Predicted Small Protein
Name | NONHSAT095643_smProtein_641:676 |
Length | 12 |
Molecular weight | 1329.5897 |
Aromaticity | 0.0909090909091 |
Instability index | 60.2545454545 |
Isoelectric point | 6.68389892578 |
Runs | 4 |
Runs residual | 0.0454545454545 |
Runs probability | 0.00865571453805 |
Amino acid sequence | MNYCSLVLHIH |
Secondary structure | LLHHHHEEEEL |
PRMN | - |
PiMo | - |