NONHSAT095829

From LncRNAWiki
Revision as of 00:55, 17 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT095829

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1177 nt

Genomic location

chr4+:25285129..25286305

Exon number

1

Exons

25285129..25286305

Genome context

Sequence
000001 cttcttttca aaagacactt ttaagaaact gacatttcta gctacaaact gagagaaaat gtttgccaaa catatctagt 000080
000081 aaagtacctg tatccagaat tccagaatgt atgaagtgat cttacaactc aagaatattc ccaggccggg cgcagtggct 000160
000161 catgcctgta atcccagcac tttgggaggc caaggcgaac gaatcacttg aggccaggag ctcaagacca gcctggccaa 000240
000241 catggcaaaa ctctactaaa aatagaatta gccgggctgg tggcacatgc atgtaatccc agctacttgg gaggctgagg 000320
000321 catgagaatc ccttatatct gggaggcaga ggttgcagtg agctaagatc atatcactgt actccagcct ggatgaccga 000400
000401 gcaagacttt gtctcaaaaa aattaattaa caataataaa agaatattcc caattaagaa ccaaaagatt taaaaagaca 000480
000481 cttcacaaaa aaagatgtag aaatgaatgt ccaataagca catgaaaaga tattcaacat tgttagtcat taggaaaatg 000560
000561 caaataaaaa ccaTGAGtaa agttaaacat acacttatac catccggtca ttccacatct ttgtacttgc ccaagataaa 000640
000641 taaaagcaaa tgtccacatg aaaatgttca tagcaggctg ttttgtaata ctccgaacta aaaataaccc aggtgtccac 000720
000721 caacaggtga atggataagc aaaatgcagc atatccatac aataaaaaga tatgaactac taatacacag tgacatggat 000800
000801 gaatttcaaa atcattacgg taactggaga agccagacac agaacatact gtatgaattc cacttatata aaattctcta 000880
000881 aaatgaaaac taatctattg ttaaagaaaa aagtgggtat ggacattgaa ggagggttag attgcatgca ggcataagga 000960
000961 aactttggga gatgatggaa atatttttat tttatgatcc aggatctatg tataagacat gcagatttat tacataggta 001040
001041 aacgtgtgac atgatggtgt gctccatcta tcaacccatc acctaggtat taagcctcat atgcattagc tatttatccg 001120
001121 gatgctgtcc cttcccccat accatccctg caacaggccc cagtgtgtgt agttccc
[back to top]

Predicted Small Protein

Name NONHSAT095829_smProtein_506:700
Length 65
Molecular weight 7434.7848
Aromaticity 0.046875
Instability index 43.459375
Isoelectric point 10.424987793
Runs 9
Runs residual 0.00796875
Runs probability 0.02050089305
Amino acid sequence MSNKHMKRYSTLLVIRKMQIKTMSKVKHTLIPSGHSTSLYLPKINKSKCPHENVHSRLFC
NTPN
Secondary structure LLLHHHLHHHHHHHHHHHHHHHLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLEEE
LLLL
PRMN -
PiMo -