NONHSAT095829
Revision as of 00:55, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095829 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1177 nt |
Genomic location |
chr4+:25285129..25286305 |
Exon number |
1 |
Exons |
25285129..25286305 |
Genome context |
|
Sequence |
000001 cttcttttca aaagacactt ttaagaaact gacatttcta gctacaaact gagagaaaat gtttgccaaa catatctagt 000080
000081 aaagtacctg tatccagaat tccagaatgt atgaagtgat cttacaactc aagaatattc ccaggccggg cgcagtggct 000160 000161 catgcctgta atcccagcac tttgggaggc caaggcgaac gaatcacttg aggccaggag ctcaagacca gcctggccaa 000240 000241 catggcaaaa ctctactaaa aatagaatta gccgggctgg tggcacatgc atgtaatccc agctacttgg gaggctgagg 000320 000321 catgagaatc ccttatatct gggaggcaga ggttgcagtg agctaagatc atatcactgt actccagcct ggatgaccga 000400 000401 gcaagacttt gtctcaaaaa aattaattaa caataataaa agaatattcc caattaagaa ccaaaagatt taaaaagaca 000480 000481 cttcacaaaa aaagatgtag aaatgaatgt ccaataagca catgaaaaga tattcaacat tgttagtcat taggaaaatg 000560 000561 caaataaaaa ccaTGAGtaa agttaaacat acacttatac catccggtca ttccacatct ttgtacttgc ccaagataaa 000640 000641 taaaagcaaa tgtccacatg aaaatgttca tagcaggctg ttttgtaata ctccgaacta aaaataaccc aggtgtccac 000720 000721 caacaggtga atggataagc aaaatgcagc atatccatac aataaaaaga tatgaactac taatacacag tgacatggat 000800 000801 gaatttcaaa atcattacgg taactggaga agccagacac agaacatact gtatgaattc cacttatata aaattctcta 000880 000881 aaatgaaaac taatctattg ttaaagaaaa aagtgggtat ggacattgaa ggagggttag attgcatgca ggcataagga 000960 000961 aactttggga gatgatggaa atatttttat tttatgatcc aggatctatg tataagacat gcagatttat tacataggta 001040 001041 aacgtgtgac atgatggtgt gctccatcta tcaacccatc acctaggtat taagcctcat atgcattagc tatttatccg 001120 001121 gatgctgtcc cttcccccat accatccctg caacaggccc cagtgtgtgt agttccc |
Predicted Small Protein
Name | NONHSAT095829_smProtein_506:700 |
Length | 65 |
Molecular weight | 7434.7848 |
Aromaticity | 0.046875 |
Instability index | 43.459375 |
Isoelectric point | 10.424987793 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.02050089305 |
Amino acid sequence | MSNKHMKRYSTLLVIRKMQIKTMSKVKHTLIPSGHSTSLYLPKINKSKCPHENVHSRLFC NTPN |
Secondary structure | LLLHHHLHHHHHHHHHHHHHHHLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLEEE LLLL |
PRMN | - |
PiMo | - |