NONHSAT095925
Revision as of 00:56, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095925 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
913 nt |
Genomic location |
chr4+:29408722..29409634 |
Exon number |
1 |
Exons |
29408722..29409634 |
Genome context |
|
Sequence |
000001 ATAACCATAG ATGAGGCAGT GAAGAACAGA TTGAGAGATT CATAGATATA TGAGACCTAC TCTCAGCAGA GGAGTCTGTG 000080
000081 ATAGGTTACA GAGTTCCCTA CTCTGGACAG AAAGTCTTGC CATTCCAGGC TCTCAAGAAG GGCCTCATCT CCAGGCCTTG 000160 000161 AAACTGCTGG CTACACAACT ATTCACAGGT GGCATCATGT ATCTCCAAAA AGAGCCATCC CTTGCCGCTG GACATCACTT 000240 000241 GTGCCAAGGG GTACCTGGAT GAAAAAACAA GATGTGTTAA TTGGTATCCA GGGACAATGC CAATGTGTGC TATGACACCT 000320 000321 ACACAGGAGC AGGTCATGCA CAGCTGGCTT CAGCAGTGAT ACTGACATTG TAAGCTGACA AGCTGAAAAG CTGGCAGGGC 000400 000401 TGAGCCTGCT GCCACTCTCA GAGAAGAATA TCTGGGCCCA AAAGAAGGAT CTCTACATCA ACATCTAACC ATATGAGTCC 000480 000481 TTCCAAAGCC ACAGATGAGG TGCCCATTGG CAGCTTCCAG GATATTAGAG TCATGGTGTT GGAGCATAAC AACAGTTTGT 000560 000561 ACTTCATGGA GAAGTACAAT TAGGGACTGT CCTGGAAGTC ACAGGTGAGC AAGCCCCCAT GGAGAAGATT ATCAAGATCC 000640 000641 TCACCATTAT CATTAAGGAG ATGGTGACCA AGTGGCAGGA GAAACTCTCT TTCAGTATCC TCTGTATGTC AATCCCAAGC 000720 000721 ATTAAGCTTC TTGACACCAA GGGTCTCACC ATGGCATAAG TTAAGCAGCT TGATGATGGC AAGATGTCAA TGAAGGACAC 000800 000801 CTTAGATCTG GGCATCATTA AGATGCTCCT CAAAGGTAGT GGTGGTGTTG CTGGTGCTTC TGGGCAGACT CCAAGGAAAG 000880 000881 AGTGACCAGC TACAAGCCTA TGAAGTGGTG CCT |
Predicted Small Protein
Name | NONHSAT095925_smProtein_494:607 |
Length | 38 |
Molecular weight | 4267.9177 |
Aromaticity | 0.0810810810811 |
Instability index | 60.8054054054 |
Isoelectric point | 9.00250244141 |
Runs | 6 |
Runs residual | 0.017604760724 |
Runs probability | 0.0341223576518 |
Amino acid sequence | MRCPLAASRILESWCWSITTVCTSWRSTIRDCPGSHR |
Secondary structure | LLLLHHHHHHHHHHHHEEEEEELLLHHHHLLLLLLLL |
PRMN | - |
PiMo | - |