NONHSAT095973
Revision as of 00:56, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095973 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1038 nt |
Genomic location |
chr4+:34020692..34021729 |
Exon number |
1 |
Exons |
34020692..34021729 |
Genome context |
|
Sequence |
000001 ttagctaatt gtcctaatgc tctcctttgc cttgtcccct acccccaact ggcccaggtg agtgttgttc ccctgcctgt 000080
000081 gtccatgtgt tctcattgtt caactcccac ttatgagtga taacatgtgg tgtttggttt tctgttcctg ttagtttgtt 000160 000161 gaggatgCCt ttttcttttt tttctttttt tttttttgag atggagtctc gctttgtcgc ccaggctgaa gtgcagtggt 000240 000241 gtggtctcca ctcactgcaa gctctgcctc ccgggttcaa gccattctcc tgcctcagcc tcccaagtag ctgggactac 000320 000321 aggcgcccac caccatgctt agctaagttt tggtagtttt ggtagagacc gtgtttcact gtgttagcca ggatggtctt 000400 000401 gatctcctga cctcgtgatc cgcctgcctt ggcctcccaa gccttttatt tttctcttac ctgattgctc tggctaggac 000480 000481 tatgttgaat aggagcagtg aaaatgggtg tccttgtctt gtgccagttc tcagggagaa tgcttctagc gtttgcctga 000560 000561 tcaatatgat atttgctgtg catttgtcct ggttgcccct taatattttt aggtctgttc ctttgctgcc tagtctgttg 000640 000641 aggattttga tcatgaaagt aagctgggtt ttaccaaaag cttaatctgt gtctgttgag atgatcatac agattttggt 000720 000721 tttgattctg tttatgtggt gaatcacatg tactgatttg catatattga accaaccttg catcccagga ataagcttac 000800 000801 ttgattgtgg tgaacttact ttttgatgtg ctactggatt caacttgtta ttattttttt gagggttttg tgtctaggtt 000880 000881 tatctattgg cctgtagttt tcttttcttt cttttttttt tttttgtctc tgccagattt tggtatcagg atgatgataa 000960 000961 cttcatagct aacattcaga atctatgagg aacttacaca aatcaaaaag aagaaaacaa ataatccaag taaaaaat |
Predicted Small Protein
Name | NONHSAT095973_smProtein_164:355 |
Length | 64 |
Molecular weight | 7428.5705 |
Aromaticity | 0.238095238095 |
Instability index | 71.5936507937 |
Isoelectric point | 7.74005126953 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0226697285521 |
Amino acid sequence | MPFSFFSFFFFEMESRFVAQAEVQWCGLHSLQALPPGFKPFSCLSLPSSWDYRRPPPCLA KFW |
Secondary structure | LLLLEELLLHHHHHHHHHHHHHHHHHHLHHHHHLLLLLLLLEELLLLLLLLLLLLLLLLL LLL |
PRMN | - |
PiMo | - |