NONHSAT096700
Revision as of 00:59, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096700 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
873 nt |
Genomic location |
chr4+:68586138..68595885 |
Exon number |
3 |
Exons |
68586138..68586769,68594258..68594404,68595792..68595885 |
Genome context |
|
Sequence |
000001 AGAAATCCTG GCTGACATTG ACTTCTCCAC TGCAACCATC GAGTTCATTG TCTCCTAAAC CTTGCCATGG AGGCCTGTGG 000080
000081 CACCTGAGCC AGCCATTATC ATCACCAGCA CTTCCATGAG CTACAAGCTG GACCCACTGC AGTCCTCCTG ACACACTGAA 000160 000161 ATCAGAGCCT GCACACAGAG CAGCAGATGC TTCAATGTAA AGGTCATTTC CAGGTCCTTG ACAGGCGTGC ATCTGGGCCA 000240 000241 GATCCATGGC AATAACCTTC AGGTTGAGGC TAGAGGGCTT CAGATGGGCA GCTTCGAATG ACAGGAGCAA GGCACAAGAG 000320 000321 GCCGGAAAGG GAGGGTGACA TTTTCAGCAT CTATAAGATC AACTTTAGAA ACATTTGGGG GTTGACAAAT TCCCATCAAG 000400 000401 CTCTGTGGAT CTTGTACAAC TGCTCACCAC CGGCTTCTCA TCAGCACATG ATTGGTGCAG GGTTCTGAGG ATGATTTTGA 000480 000481 GATGTTCCCT GATGTGGTCT TGTGAGGAGA TTTCATGACA GATGGCAGGA AGCTTCGTGG AGAGATTTCT GAAGACACTC 000560 000561 CTGAGCTCCC AACACCGGGC AACTCTCTTC CAGAGGATAG TGGGGTGGAG GGTAGAAGAG AGGCAAAGTC AGgagaaggg 000640 000641 aaaatgttac atTGTCAAAG TCCCAAAGCC TTTCAGCCTG AAGCCAGGAA CAATTGTTCA AAGTTTCTTT GGAACATCAA 000720 000721 GGAAGGAAAT CCAGAtttta ctttaagtgc aatggggagt cattaaggat tttgtgtaga tacagcaaaa agacaacaat 000800 000801 cttcaagcca caatggccct caccagaacc cagccatgtg gtcagcctga tctcggactt cacagccagc aga |
Predicted Small Protein
Name | NONHSAT096700_smProtein_521:745 |
Length | 75 |
Molecular weight | 8555.9767 |
Aromaticity | 0.108108108108 |
Instability index | 40.4608108108 |
Isoelectric point | 10.4413452148 |
Runs | 14 |
Runs residual | 0.046539222149 |
Runs probability | 0.046451914099 |
Amino acid sequence | MAGSFVERFLKTLLSSQHRATLFQRIVGWRVEERQSQEKGKCYIVKVPKPFSLKPGTIVQ SFFGTSRKEIQILL |
Secondary structure | LLHHHHHHHHHHHHLHHHHHHHHHHHLLLEEEEEELLLLLLEEEEELLLLLLLLLLEEEE EEELLLHHHHEEEL |
PRMN | - |
PiMo | - |