NONHSAT096700

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT096700

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

873 nt

Genomic location

chr4+:68586138..68595885

Exon number

3

Exons

68586138..68586769,68594258..68594404,68595792..68595885

Genome context

Sequence
000001 AGAAATCCTG GCTGACATTG ACTTCTCCAC TGCAACCATC GAGTTCATTG TCTCCTAAAC CTTGCCATGG AGGCCTGTGG 000080
000081 CACCTGAGCC AGCCATTATC ATCACCAGCA CTTCCATGAG CTACAAGCTG GACCCACTGC AGTCCTCCTG ACACACTGAA 000160
000161 ATCAGAGCCT GCACACAGAG CAGCAGATGC TTCAATGTAA AGGTCATTTC CAGGTCCTTG ACAGGCGTGC ATCTGGGCCA 000240
000241 GATCCATGGC AATAACCTTC AGGTTGAGGC TAGAGGGCTT CAGATGGGCA GCTTCGAATG ACAGGAGCAA GGCACAAGAG 000320
000321 GCCGGAAAGG GAGGGTGACA TTTTCAGCAT CTATAAGATC AACTTTAGAA ACATTTGGGG GTTGACAAAT TCCCATCAAG 000400
000401 CTCTGTGGAT CTTGTACAAC TGCTCACCAC CGGCTTCTCA TCAGCACATG ATTGGTGCAG GGTTCTGAGG ATGATTTTGA 000480
000481 GATGTTCCCT GATGTGGTCT TGTGAGGAGA TTTCATGACA GATGGCAGGA AGCTTCGTGG AGAGATTTCT GAAGACACTC 000560
000561 CTGAGCTCCC AACACCGGGC AACTCTCTTC CAGAGGATAG TGGGGTGGAG GGTAGAAGAG AGGCAAAGTC AGgagaaggg 000640
000641 aaaatgttac atTGTCAAAG TCCCAAAGCC TTTCAGCCTG AAGCCAGGAA CAATTGTTCA AAGTTTCTTT GGAACATCAA 000720
000721 GGAAGGAAAT CCAGAtttta ctttaagtgc aatggggagt cattaaggat tttgtgtaga tacagcaaaa agacaacaat 000800
000801 cttcaagcca caatggccct caccagaacc cagccatgtg gtcagcctga tctcggactt cacagccagc aga
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Predicted Small Protein

Name NONHSAT096700_smProtein_521:745
Length 75
Molecular weight 8555.9767
Aromaticity 0.108108108108
Instability index 40.4608108108
Isoelectric point 10.4413452148
Runs 14
Runs residual 0.046539222149
Runs probability 0.046451914099
Amino acid sequence MAGSFVERFLKTLLSSQHRATLFQRIVGWRVEERQSQEKGKCYIVKVPKPFSLKPGTIVQ
SFFGTSRKEIQILL
Secondary structure LLHHHHHHHHHHHHLHHHHHHHHHHHLLLEEEEEELLLLLLEEEEELLLLLLLLLLEEEE
EEELLLHHHHEEEL
PRMN -
PiMo -