NONHSAT097545

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT097545

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1880 nt

Genomic location

chr4-:100869245..100871456

Exon number

2

Exons

100869245..100870097,100870430..100871456

Genome context

Sequence
000001 GGAGCAGGGA AGGCGGGAGA CAGCGCAGTT TGAATCGCGG TGCGACGAAG GAGTAGGTGG TGGGATCTCA CCGTGGGTCC 000080
000081 GATTAGCCTT TTCTCTGCCT TGCTTGCTTG AGCTTCAGCG GAATTCGAAA TGGTAAACTT CGCAGAGACG CTCGATGACT 000160
000161 CCGCGGGTTT TTGCCGGCGA GAGAAAAACC CGTTACACAG AGGGATGGGG GTGAAGTGGC GACGGTTGGG AACGCGCGGA 000240
000241 GACAGGATTT AGAAGAGTGG GGGGAGGTGT TTTGTCGGCT GCTAGCGGAG CAGCCTCGGA TCTCGCggcg ggcggcgacg 000320
000321 gttgggtggc gcgcgcagcg ccgctggggg ccggcgggcg gaggcgcgcg gccgtggcga gcgcgcggcg gggggcgaac 000400
000401 gggcggggtc gcccctgcgg cgcgccgcgg gccggagacc ccggcagggt gcggggacgc gctcgcggcg ggacgcgccg 000480
000481 cggtggggga tgggcgcgcc gcCTTGGTAA TTCTATATTC TCCGTTCCTC CTCCGCTCGC GGGCGTGTGC GCGCCGCAGG 000560
000561 CTGGCGGTAA GGCTGGAAAG GACTCCGGAA AGGCCAAGAC AAAGGCGGTT TCCCGCTCGC AGAGAGCCGG CTTGCAGGTC 000640
000641 AGTAGTTGTT CGTGCAGTCT GGGAGTCATG ATGTTTTTCT TTGCATTTCC TTTTTTGTTA TTCATCGCTC TCGATGGGCG 000720
000721 TTTTGTGTAT GCGTGGGTGA TGCGGTGTCG CGACTTGGGC TGCCCATACG ATAAATATGG GGGGGAGGAA TCACGTGTTT 000800
000801 CGATGTCGGG ACGCGTTGCT GCGCCCGTGC CCCTTGCTTT GGCGCGCATA TAATTTCCCC ATCTCTAGTT CTCATTTTTG 000880
000881 TGCATTTATG TTTGTGTATG CTTAAAATTT AAGTTCCCAG TGGGCCGTAT TCATCGACAC CTAAAATCTA GGACGACCAG 000960
000961 TCATGGACGT GTGGGCGCGA CTGCCGCTGT GTACAGCGCA GCCATCCTGG AGTACCTCAC CGCAGAGGTA CTTGAACTGG 001040
001041 CAGGAAATGC ATCAAAAGAC TTAAAGGTAA AGCGTATTAC CCCTCGTCAC TTGCAACTTG CTATTCGTGG AGATGAAGAA 001120
001121 TTGGATTCTC TCATCAAGGC TACAATTGCT GGTGGTGGTA TGTTAACTTC TAACATTTTA AAAAATTTCT TCAGAGGAAG 001200
001201 GAATTTTTTG CTGCTTTTAA TTAGTTTTTC CAGGAGAGGA AATTTAAGTA TATTTTCAAT GATGGAAGTA TGGTTGTATC 001280
001281 ATGAAATTTG ATTTATATGT ATAACTCAAT GAATTTTTAC TTCATACTTG AGCTGCATGT TTTTAAAGAT ACCTTTCAAG 001360
001361 TTGAACAGTA TACACTTTCT TGGTTTCAAA TACTGTGATT TTTTAAAAAA TCTTAAGTAG AATTAATTCC TGTCACTCTC 001440
001441 CTAGGTGTCA TTCCACACAT CCACAAATCT CTGATTGGGA AGAAAGGACA ACAGAAGACT GTCTAAAGGA TGCCTGGATT 001520
001521 CCTTGTTATC TCAGGACTCT AAATACTCTA ACAGCTGTCC AGTGTTGGTG ATTCCAGTGG ACTGTATCTC TGTGAAAAAC 001600
001601 ACAATTTTGC CTTTTTGTAA TTCTATTTGA GCAAGTTGGA AGTTTAATTA GCTTTCCAAC CAACCAAATT TCTGCATTCG 001680
001681 AGTCTTAACC ATATTTAAGT GTTACTGTGG CTTCAAAGAA GCTATTGATT CTGAAGTAGT GGGTTTTGAT TGAGTTGACT 001760
001761 GTTTTTAAAA AACTGTTTGG ATTTTAATTG TGATGCAGAA GTTATAGTAA CAAACATTTG GTTTTGTACA GACATTATTT 001840
001841 CCACTCTGGT GGATAAGTTC AATAAAGGTC ATATCCCAAA
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Predicted Small Protein

Name NONHSAT097545_smProtein_776:904
Length 43
Molecular weight 4951.8027
Aromaticity 0.190476190476
Instability index 44.7904761905
Isoelectric point 9.60760498047
Runs 8
Runs residual 0.0143158529234
Runs probability 0.123167284932
Amino acid sequence MGGRNHVFRCRDALLRPCPLLWRAYNFPISSSHFCAFMFVYA
Secondary structure LLLLLLLHHHHHHHLLLLLHHHHHLLLLLLLHHHHHEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL
PiMo iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToo