NONHSAT097619
Revision as of 01:03, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097619 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
406 nt |
Genomic location |
chr4-:103822260..103853456 |
Exon number |
2 |
Exons |
103822260..103822489,103853281..103853456 |
Genome context |
|
Sequence |
000001 TTTTGTTCTA GGTGCTGTCT CTCCTGCTGT TGTTGTCCCT TACATGATGG TGCTGCAAGA AAATGGATAT GGTGTTGAGG 000080
000081 AAGGCATTCC AACCTTATTA ATGGCTGCTA GCAGTATGGA TGACATTCTG GCTATCACTG GATTCAATAC ATGCTTGAGC 000160 000161 ATAGTCTTTT CCTCAGGCTG TGTTAGGTCC TCTGGCTCTA GAAACAGCAA GAGTCTCCGC ACCCCACTTG GAACCATATG 000240 000241 CGAAGGATGT GATGACAGTA GCATTTTTAG CCATCTTGAT CACAGCTCCA AATGGAGCTC TACTTATGGG CATTCTGGGG 000320 000321 CCTAAAATGC TTACACGCCA TTATGATCCA AGCAAAATAA AACTGCAGTT GTCAACATTA GAACATCATT AAAAAGTTTA 000400 000401 CCTGTC |
Predicted Small Protein
Name | NONHSAT097619_smProtein_251:391 |
Length | 47 |
Molecular weight | 5056.0651 |
Aromaticity | 0.0434782608696 |
Instability index | 44.8304347826 |
Isoelectric point | 9.52313232422 |
Runs | 11 |
Runs residual | 0.0777691511387 |
Runs probability | 0.0383966854555 |
Amino acid sequence | MTVAFLAILITAPNGALLMGILGPKMLTRHYDPSKIKLQLSTLEHH |
Secondary structure | LHHHHHHHHHHLLLHHHHHHHLLLHHHLLLLLHHHHEEHHHHHHLL |
PRMN | LLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | i????????????????????????????????????????????? |