NONHSAT097738
Revision as of 01:04, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097738 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
873 nt |
Genomic location |
chr4-:108969510..108994052 |
Exon number |
7 |
Exons |
108969510..108969907,108984779..108984819,108985492..108985540,108991819..108991926,108992814..108992899,108993159..108993289,108993993..108994052 |
Genome context |
|
Sequence |
000001 GATGATGTTT CCTTTTGTAT CCAGTTTGGT TTTTCTCCCT GTGAAGGTCT GTAATACTAG GGCAGCCATG AATGGGAAAG 000080
000081 AATCTCATAG CCTGCAATGG GAAGGAAGCA AAATGGGAAG CTCCACACCT GAGAGTTGGG GGAGAGCAGG AGCAGGGAGG 000160 000161 CTCCCAGCTG ACAGATTGTG TGTGCACACA GATGGTTCTC CCTGGAAAGT TCTGCTGGCA GATCCTGGCA TTGGGGAAGT 000240 000241 TGGGAAAATA CATGAACACT GTCTGCTGGG GACTGGGTGG CATGCCCTCT CCCGTGAAGA GCAGGCTAAA TATTATGAAT 000320 000321 TAGCACGGAA AGAAAGACAG CTACATATGC AGCTTTATCC AGGCTGGTCT GCAAGAGACA ATTATGGTAA GAAAAAGAAG 000400 000401 AGGAAGAGAG AGAAACTACA GGAATCTGCA TCAGGTACAG GTCCAAGAAT GACAGCTGCC TACATCTGAA ACATGGTGGA 000480 000481 AAACGAAGCT CATTCCCAAC GTGCAAAGCC AAGGCAGCGA CCCCAGGACC TCTTCTGGAG ATGGAAGCTT GTTGAAAACC 000560 000561 CAGACTGTCT CCACGGCCTG CCCAGTCGAC CCCAAAGGAA CACTGACATC AATTTTACCC TGAGGTCACT GCTAGAGACG 000640 000641 CTGATCCATA AAGACAATCA CTGCCAACCC CTCTTTCGTC TACTGCAAGA GCCAAGTTCC AAAATAAAGC ATAAAAAGGT 000720 000721 TTTTTAAAAG GAAATGTAAA AGCACATGAG AATGCTAGCA GGCTGTGGGG CAGCTGAGCA GCTTTTCTCC CCTCATATCT 000800 000801 GCGTGCACTT CCCAGAGCAT CTTGCATCCA AACCTGTAAC CTTTCGGCAA GGACGGTAAC TTGGCTGCAT TTG |
Predicted Small Protein
Name | NONHSAT097738_smProtein_71:322 |
Length | 84 |
Molecular weight | 9023.5835 |
Aromaticity | 0.0602409638554 |
Instability index | 61.6530120482 |
Isoelectric point | 8.94989013672 |
Runs | 11 |
Runs residual | 0.00749665327979 |
Runs probability | 0.0442340736459 |
Amino acid sequence | MGKNLIACNGKEAKWEAPHLRVGGEQEQGGSQLTDCVCTQMVLPGKFCWQILALGKLGKY MNTVCWGLGGMPSPVKSRLNIMN |
Secondary structure | LLLEEEEELLLLLEELLLLLLLLLLLLLLLLLLLLLEEEEEELLLHHHHHHHHHHHLLHH HHHHHHLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |