NONHSAT097852
Revision as of 01:04, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097852 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
749 nt |
Genomic location |
chr4+:113369119..113369867 |
Exon number |
1 |
Exons |
113369119..113369867 |
Genome context |
|
Sequence |
000001 GGAGTGAGTT GAGTTTTGCA GTAACAACAT TTAAAAAGCA AAGTTTGAGG AGTTGAGTTC AACTTAAGGA GACAATCTTT 000080
000081 GTTTCTTCAG ATATCAGAAA TGTCAGGCTT TTGTTACTGT CTTTTAGCAG TGCTATTATT TTGAAGATGA TATTTGTTCT 000160 000161 GTGTGGTTTT AATATACAGA TGTCCTCTGC CTGAACAGTT CAGTAGAAAC TAGGTATAAA GTACAAGAAG CAAGCAAGAG 000240 000241 AGGGTAAGAG AAAAAAAAAT AAATCTCTTT ATTATGGTGC ATAAACCTTC AGTGTGAGGG AGCTTTGCAG CTGCACAAGG 000320 000321 AGAAAAATGC ATTCAAAAAT ATAATGCAAG TGTGAATAAT CCTTTCTCGA ATGCTGCTTG CAGACTGCTC CAGCTTTGTC 000400 000401 AGGTGAACTT GAACCGGGCC ATCAGATTTG CCCCCATTCC CATTGCACAC TCTGTCTATC ACCCCAGGGC ATTCACCATC 000480 000481 TTGACTGTTG TTTAAAGAGA ACAAGCAATC CATCATTGAG CCAGGGAGTC ACTTTCTCAT AGAAAAGTAA AATCAGCATG 000560 000561 TGACACTACT CAGCCCTAGT GTTTTGCAGA TTAAAATGAT ACATGGCGAC TCACGTGTTA CTAGGAGGAT TAAGTTGGTT 000640 000641 ATCTTGTTCC ATTGCCCAGA CAAAAGAATT CCCCTCAAGC AGTAAGTGGG AGCTTTACAG AAGCTAAAAT CGTTGGGCTC 000720 000721 AACTATACAG TGGTAAGACA GAGAATTTA |
Predicted Small Protein
Name | NONHSAT097852_smProtein_602:706 |
Length | 35 |
Molecular weight | 3814.3469 |
Aromaticity | 0.117647058824 |
Instability index | 60.7911764706 |
Isoelectric point | 7.95794677734 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0347111817699 |
Amino acid sequence | MATHVLLGGLSWLSCSIAQTKEFPSSSKWELYRS |
Secondary structure | LLHHHHHHHHHHHHHHHHHHLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |