NONHSAT098621

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT098621

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1142 nt

Genomic location

chr4+:146107175..146108316

Exon number

1

Exons

146107175..146108316

Genome context

Sequence
000001 AATAATCTTA TCTGTAAATT TACAACAGAA TGAAATGATA GGAGAGAATG TATGCTATAG CTTTTGTGTT TCATTTGCAA 000080
000081 GCTATCACAA GGAGGAACTG GCTGGTAGTA GTAAAAGATT TTACCTAGTA AGCTTATGAT TCTATACGCA TTGCCCACCT 000160
000161 TCTCTGGTAA CTTGGAATAT CAACCTTAGC AAAGTCCTTC ACAAGCCTTC CAAGTCTTCA ATACTATACA TTCCTGCATA 000240
000241 GCAGAAAATA ACATTGCATG AGTTAGTTTA CCTTTTCCTT GCTAGAGCAA AAGGATCAAA AGAATTACAG AGGGGAGACT 000320
000321 TCATCTCCCA AAATGGGAAG CAAATACTTC TTACTGCAGG AGAGTGTTTG AAGATCAAGG CTTGAAAGAA AAGAAGACCA 000400
000401 CTTTTCTTAG TTTTTAAAGT AATTTTTAAA ATTTCACTCT GGCTTAATGG TCATCAAGAT CAATTCAAAA AATTACAAaa 000480
000481 gaaaaaaaaa aaggaaagaa ggaaggaagt acaaggaagg GTAAAGGGGC CAGGACCCTG GTGCCATCTA TTAGCCAAGT 000560
000561 GAGCTAACCT AGAGAAGGAC CTTGCAAGGG GCTTGGCTGC AAATGCTCAG ATATCTGTCT TTTCTAGCTC ACCATCCAGC 000640
000641 CTCCGCATGA GGGAGCATCT CTTGTTGGCC ATGCTACTTA ACTGTACCAG CACTTCGTAG CTTGACTGCT CTGTAGTACC 000720
000721 AAAGTTGGTA TATGCCATGA GATCCTTACT CAATCCTAGT AGAGAAAAAA GAGCCCCCAT CTGCACTTTA GACAGATGAA 000800
000801 CTGAATAAGT TTCAAACCCC AGAGCTAGGA CTGCAGTCCT GAGACCCTAT AACCTGTATG ACTAGAGAAG TGAAACTATG 000880
000881 ATTTAGTTTC TTATTAGAGC TTCGACTTCC GTATATTCCT ATGCCTAAGC TGGATGAACT AATAAACCTC ACAGTAGACT 000960
000961 GAGGCTCTTA CACAAGTAGC TATAGCTAGT CATAGTCCAT TATCTCTGCA AATAAAACCT CCACGTACTT CCAACCATTT 001040
001041 ACCTCTCCTT CCACCACTAC CTCTTGATTC CACCCTGACA GAAGCAAACT TGCAAAGTCC CATTGCAAGG TATTTACTTT 001120
001121 AGCTCCCCAA ATAGGATTGT AA
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Predicted Small Protein

Name NONHSAT098621_smProtein_47:127
Length 27
Molecular weight 3139.7139
Aromaticity 0.192307692308
Instability index 63.8961538462
Isoelectric point 9.98443603516
Runs 5
Runs residual 0.0169946332737
Runs probability 0.016304539834
Amino acid sequence MYAIAFVFHLQAITRRNWLVVVKDFT
Secondary structure LHHHHHHHHHHHHHHLLLEEEEEELL
PRMN -
PiMo -