NONHSAT099744

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT099744

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2432 nt

Genomic location

chr4+:189376732..189459706

Exon number

6

Exons

189376732..189376828,189377818..189377916,189397852..189397910,189398792..189399066,189406933..189407019,189457889..189459706

Genome context

Sequence
000001 AGACATCTGG GCAAGTCAAC AGGAAGGTGG ATATCCAAAT CTCTCTCTTC GCAATGAGTT TCCAGTTAGA TGGAGGAGAG 000080
000081 AGTAATAAAA CACAGAGCTG AGATTCCTGA CTTCACAGAT CCCTGAGGAG ATGTTTACTA AAGGGAATCT TCTGGTCACT 000160
000161 GTTACCTTCC TCCGTACTTA CCTGCCTCAT GGATAACACT GAAGAATGCA GTTTACTTAC ATCTTTTTCT GTTTGACAGA 000240
000241 AGACAGTTAT TAGTTACCCT TGGGACATCA AAATGACCAA GGCAGTGTCT GCTAAGTATT TGCTGAGACT CTGCTATGAT 000320
000321 TCTTTCAAGT CTAAAGACAG TTATCTGAAT GATATCCCCG TGACAGTGGA CTCCTGCACA TTCACAGTCC TGGAAGGAGC 000400
000401 CTGTCCACAT TGGCATTCTG GAAGTCCATA AAAGACAAAC GCATATGCAG TCCCCGAGAA AGCATTGTTG TAAACAAATC 000480
000481 TGCACTAGAT GGAAACTCTG TTATGTGGTG CCGGCATGCA TGGAAGAGAA CCCGAAAGGA AGAAGCTATA CGACTGGGGA 000560
000561 CACATGTCTT AGAAGCACAC TCATTAGATA AAGTGTCGCA TACTCTTTGA TAAGACAACC CTTACAAGAT TTTTGCCCAG 000640
000641 CGAAAGTGGC ACGTGGAACA TGGAATGACA TTTCATAAAG ATAAATCCAG AGATTAGTGC TGAAGACTAC ACCCCTGTGT 000720
000721 AGTCCCACAC AGGCTACCCC AGACCAGCCT GGCGGGCTCT GCACTAGGCC TCCCATCAGG CGAGAGCCAA CGCTCCTCAG 000800
000801 CCCGGCTCCA CCTCATTCAG AAGAAAGTGT GTCTCCCGGC CTCACATTGC GCTGAATGCA AGGATACCGA GATAAACCAG 000880
000881 GCTTTCCTTC GCTCAGAGTA CAGTTGCAGA CTTGGTAATG ACTGAGCCAA GCCAGACTGA CTGTGATAAG ATAATAAATT 000960
000961 AACTACCAGT CAGGAGCTAA GTCAGCAGAT GTGCGAACAT TTTAGAGGTA ACATCATAAA CTAGAACAGA GGAGCTCTTG 001040
001041 GGAAGAAAAA GGGCTTGGAA ATTATACCTG GAAAGATACC GCTAATAATG ATCAAGAAGA AAAAACAAAT CCAGTTTGGA 001120
001121 AGTGAGCAAT CATTTATGAT GTAAAATATT TCTTAGAAAT GGAATCTAGA TAATGCTTGG AATATGCTTT AAACTACCTA 001200
001201 TATTTAATTT GTTTTTCTTG TGATTTTTGT ATTGTTTGGT GTAAAATAAT CTTAATCTTT CCAGGTGGTG TCTAATTAAG 001280
001281 GCACATTTAC TGATATGAGT CATTTTCTAA ATATACTTTA TCTAAGAAAA TTTAAAATTT TTGGATCAAC TAAAAACTCT 001360
001361 CTCAATTATT TTAGAGTTAA CTCTTCCAAA TTCTAAAATG TATTCATAAA TTATATACAA CTATTTTAAT GGTCACTGTG 001440
001441 GGCCCAACTT CTGTATATAA ATTTACCTTC TTATTTTACA GGTGCTAATG TTTAAAGATA CTTAAATATG CCAATTTCTT 001520
001521 TCCTCTATGT AGAAGTTTGA AATACATTCT ATGCCCTGAG AGAACCCTTT GAAATTTGAA CACATAGAGT ATTGTTATGT 001600
001601 GCTTTCAAAA CTTTGTGTTG TATAGGACCC TCTTTTAGCT GAATATTTTT CAAGCAGTAA GCCTGTCCTG CATCGCACAT 001680
001681 GTACTGGGAC ACCCATGGAC AAAATCATAA GACTCTGTCT TCCTGACAGA TTTCCCTCCT CTCCTGGGGA ATTCTCTAAT 001760
001761 GATGTCACTC TTTTTTTGTG CCCTGTATGG TTTTTTTTTT TCAGTTTCTT CTGTGTGATG CACGTGATGC TGTTACACTG 001840
001841 CAGGGTAGCG TTTTTAAAAA ATCTGATTTA CAGTTTGTCC TACTATTATA TATTTTGCTT ATAAAAACCT TGTGTTTTTT 001920
001921 CAAAAATTCC TAACAGACTT ATTTAGGTCT AACTGACCTA AAATAAACCA CACATGGTAC AGTGTACAGT TTGATGGGCT 002000
002001 TCGACATAAG CACATATAAT GGGTTGAATT ATGTCCCTCA CGAGATATGT TAAAGTCCTA AACCCTGTTT CTCATTTGCG 002080
002081 AATAGGGCCT TTATTTGGAA ATAGGGTCAT TGCAGGTATA ATTAGCTAAG ATGAGGTTGT AGTGGAGTGG AGTGGGCCCT 002160
002161 TAATCCCCTT AATCCTAAAT GAGGGGTGTC ATCATAAGAA AGACACTGGC AAACAGATAC AGACACAGAG GGAAGAACGC 002240
002241 CACATGACAA GGAGGCAGGG GGTGGAGTGA TGCTGCCACA CGTCAAGAAG AACCTGCGGC CACCAGAGTT AGAAGAGGCA 002320
002321 AGAAAGGATT CTCTCGTGGA GGCCTCGGAC TGGCATCGCC TTGCCAACAA CGCTGATGGT GGGCTTCCAG CCTCCAGAAT 002400
002401 TGTAAGGCAA TAAATTCATG TTGTTTTAAG CC
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Predicted Small Protein

Name NONHSAT099744_smProtein_1694:1903
Length 70
Molecular weight 8306.9131
Aromaticity 0.231884057971
Instability index 41.1391304348
Isoelectric point 7.63519287109
Runs 9
Runs residual 0.0088965418281
Runs probability 0.0288621955289
Amino acid sequence MDKIIRLCLPDRFPSSPGEFSNDVTLFLCPVWFFFFSFFCVMHVMLLHCRVAFLKNLIYS
LSYYYIFCL
Secondary structure LLLEEEEELLLLLLLLLLLLLLLEEEEEELHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLL
LLLLLLLLL
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