NONHSAT099839

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT099839

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

916 nt

Genomic location

chr5-:188482..191867

Exon number

3

Exons

188482..189155,189488..189641,191780..191867

Genome context

Sequence
000001 CACCAGGACC CAGCAGCGCT CCCAGCCGGA ACTCCTCCAG GGGCCAGCGC CCCAGCACCG CGCGCGTCAC CTCCGCCTGC 000080
000081 TCCAGCAGAC CTAACTCAAG TGCTGTCCTG CTAACTACAT GGGACCTGCT GAAACCGAAA TGAACCGAGA TTCCAGTTCT 000160
000161 GTGCAGAGAT GGCTGGACCT GCGTTGGGGA CATGCCTGGA CCACCCAGCC CACTGGCCTT CACTGGTCTG AAAGGTTGTG 000240
000241 AGGCCCGTGC ACAAGTCTGG CTCTCGAGGA CTGGGGCACT CCCTGGAGGA CCCACCTCCA TCCCAGCTGT CAGAAGAAAA 000320
000321 ACTGCTGTTA CTCACGTCGC ACGGGCCTCT CCCTAGGACC CGCTGGCCCC TCAAAGCTGT GACAGCACAG ACGTGGCCTG 000400
000401 GCACCCAGCA AGGCCTCTGA CACCTGATAC ACACGGTGGG GCCAGGCCGG ATGGAGAGCA TCGCTGAGCC TGCCTCTGGT 000480
000481 TCCAAAGCTC GGGAGGCTCC TCTGCGAGGC CACCTTGTGG TGCAGAGTGG ATCTGCAGCT TGAGGGGAGC TCCAGGTCCC 000560
000561 AGCCAGACGG GGCGTGGACT CGGCGGCAGC TCCACCCAGC TGGTGTCATG GGCGTTCTGT GGGCAACAGG GTTTGGACCC 000640
000641 TAAAAGTGCC GGTTCTGTCT GCTGCTCTGA TCCGGAACAA GAGCGTCTGT CTCGTAGCAG CTACATGTGT GACACAAAAG 000720
000721 CTCTCGTCAT TTCACACGCG GTGTGGAAAA CATTCTCTAT GTCACAGGCA CACAGAACCC ACATTCACCT ATCGTTTTGT 000800
000801 AATTAAATCT TGGACCTACG CCCCAGGTGG TCAGTTCGGG CTCAGCCAAG GTGCTAATCC CCCAGGGATG GTGGGAGCAG 000880
000881 CCTGGACCCT GGCCGTTTTC TTCTCCTGGG TCTCAG
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Predicted Small Protein

Name NONHSAT099839_smProtein_191:355
Length 55
Molecular weight 5521.3868
Aromaticity 0.037037037037
Instability index 55.8740740741
Isoelectric point 11.8348999023
Runs 8
Runs residual 0.0145438121048
Runs probability 0.013690160749
Amino acid sequence MPGPPSPLAFTGLKGCEARAQVWLSRTGALPGGPTSIPAVRRKTAVTHVARASP
Secondary structure LLLLLLLLLLLLLLLLLLLLEEHHHHLLLLLLLLLLLLLLEELEEEEEEEELLL
PRMN -
PiMo -