NONHSAT101114
Revision as of 01:17, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101114 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
677 nt |
Genomic location |
chr5-:38966917..38972063 |
Exon number |
4 |
Exons |
38966917..38967329,38967439..38967529,38968045..38968132,38971979..38972063 |
Genome context |
|
Sequence |
000001 AGGTATTATT AATTTATGTA AACCTGGAAA TTCTGGGATC CAGTCTCTAA TAGGAGTACT TTGCATACCA AATATGGAAA 000080
000081 TAAGGCGAGG TCTACTTGAA GTGCTTTATG ATATATTTCG TCTTCCTCTA CCTGTTGTGA CTGAGGAGTT CATAGAAGCA 000160 000161 CTACTCAGTG TAGATCCAGG GAGGTTCCAA GACAGTTGGA GGCTTTCAGA TGGCTTTGTG GCAGCTGAGG CAAAAACTAT 000240 000241 TCTTCCTCAT CGTGCCAGAT CCAGGCCAGA CCTCATGGAT AATTATTTGG CACTGATACT CTCTGCATTT ATTCGTAATG 000320 000321 GACTTTTAGA GGTAAGACTT ATAAACCTTA TTTTATTCCA TTTTGTTTAT TTTCTCTAAC AGATTCTTTC ATgccaggtg 000400 000401 tggtgactca cgcctgtaat cccaacactt tgagaagcca aggcaggcgg atcacttcag gccaggagtt cgagaccagc 000480 000481 ctgaccaaca tggtgaaact gtgtctcaac taaaaataca aaaattagcc atgcatgatg gcatacccct gtagtcccag 000560 000561 ctactcagga ggctgacaca cgagaattgc ttgaacccgg aaggcagagg ttatactgag ctgagatctt gccgttgcat 000640 000641 tccagcctgg gcaacagagc aagcctcttg tcttaaa |
Predicted Small Protein
Name | NONHSAT101114_smProtein_209:295 |
Length | 29 |
Molecular weight | 3438.0935 |
Aromaticity | 0.178571428571 |
Instability index | 42.8428571429 |
Isoelectric point | 8.51898193359 |
Runs | 6 |
Runs residual | 0.0110663983903 |
Runs probability | 0.0312518400754 |
Amino acid sequence | MALWQLRQKLFFLIVPDPGQTSWIIIWH |
Secondary structure | LHHHHHHHHHHEEEELLLLLLEEEEEEL |
PRMN | - |
PiMo | - |