NONHSAT101187

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT101187

Source

NONCODE4.0

Same with

,

Classification

sense

Length

637 nt

Genomic location

chr5+:41925423..41930257

Exon number

2

Exons

41925423..41925600,41929799..41930257

Genome context

Sequence
000001 CGAGCCGCGC AGCGGAACAA ACTCGCCGCC GCCGCCCTTC AGCGACTGGG GCCGCCTGGA GGCGGCCATC CTCAGCGGCT 000080
000081 GGAAGACCTT CTGGCAGTCA GTGAGCAAGG AGAGGGTGGC GCGTACGACC TCACGGGAGG AGGTGGATGA GGCGGCCAGC 000160
000161 ACCCTGACGC GGCTGCCGCT ATAGAATGTG CTGTCCATAC ACAAGAAGAG CTTCAAAATC CAGCCGTCCT ATGTATGGAG 000240
000241 CTGTCACTTC TTTTTTACAC TCCCTGATCA TTCAGAATGA ACCACGATTT GCTATGTTTG GACCAGGTTT GGAAGAATTG 000320
000321 AATACCTCTT TGGTGTTGAG CTTGATGTCT TCAGAGGAAC TTTGCCCAAC AGCTGGTTTG CCTCAGAGGC AGATTGATGG 000400
000401 TAATTTTCAT GTTAATCTAC AGTTAATTCA AACACTTTGA GCTTGACATT CTTGTTAAAA AGAAAGAAAT TCATTTTAAA 000480
000481 TTAATTATTT GCTATAATGA AGTACAGTAC TTTGGTTGTT GGGAGCCCTA CCAGGTTCCA CTGAACTGAC AGAATTAATT 000560
000561 TACTTACTAT AAGAAAGCTT CCTCTTAATT CCTCAAATTT GTACAATCCA GCCTTTAAGA TTATGTGAAA ATAAATT
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Predicted Small Protein

Name NONHSAT101187_smProtein_185:439
Length 85
Molecular weight 9357.7519
Aromaticity 0.0714285714286
Instability index 51.9654761905
Isoelectric point 6.70050048828
Runs 12
Runs residual 0.00887170154686
Runs probability 0.038575340046
Amino acid sequence MCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFGPGLEELNTSLVLSLMSSEELC
PTAGLPQRQIDGNFHVNLQLIQTL
Secondary structure LLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLEEELLLLHHHHLHHHHHLLLLLLLLL
LLLLLLLLLLLLLEEEEHHHHHLL
PRMN -
PiMo -