NONHSAT101311
Revision as of 01:18, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101311 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
577 nt |
Genomic location |
chr5-:43388124..43412476 |
Exon number |
2 |
Exons |
43388124..43388578,43412355..43412476 |
Genome context |
|
Sequence |
000001 ATTTCCTGAT CGAACAGCCT CACTTGTGTT GCTGTCAGTG CCAGTAGGGC AGGCAGGAAT GCAGCAGAGA GGACTCGCCA 000080
000081 TCGTGGCCTT GGCTGTCTGT GCGGCCCTAC ATGCCTCAGA AGCCATACTT CCCATTGCCT CCAGCTGTTG CACGGAGGTT 000160 000161 TCACATCATA TTTCCAGAAG GCTCCTGGAA AGAGTGAATA TGTGTCGCAT CCAGAGAGCT GATGGGGATT GTGACTTGGC 000240 000241 TGCTGTCATG TGAGTGCTCA TCAGCCGGGA GGTCTAAACC TGCACAGTGA TTATTTCCCT GCCCAACGAA TAATAGGTTG 000320 000321 GAAAGGCTTT GCTTGATTAC AACATACAAA CAATCATCCA AACAAGGGAG GGAAGAGTAA ATATTCTGTC CATTAGGCCC 000400 000401 CAGGCTCCCT GGAGTAAATT CATAGTCTCT CTGTCCAAAG ATGTCCTGAG CCCCATACCA GCACACCATC TACTTCCACC 000480 000481 CTGTAGTGCT GTGGTTAGGA CTAAATTCCC CCAGTCACCA AAAAGTGTTC ATGACTTTCC CAAGCAAAAC AAAACCCCAA 000560 000561 ACAAAAGATA ACTCTGT |
Predicted Small Protein
Name | NONHSAT101311_smProtein_110:196 |
Length | 29 |
Molecular weight | 3339.9077 |
Aromaticity | 0.178571428571 |
Instability index | 106.271428571 |
Isoelectric point | 9.69403076172 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0319378201731 |
Amino acid sequence | MPQKPYFPLPPAVARRFHIIFPEGSWKE |
Secondary structure | LLLLLLLLLLHHHHLLEEEELLLLLLLL |
PRMN | - |
PiMo | - |