NONHSAT101866

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT101866

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1099 nt

Genomic location

chr5+:68024251..68026343

Exon number

2

Exons

68024251..68024485,68025480..68026343

Genome context

Sequence
000001 AGAATAAGCA AATAGACATT AGATATCACA GATATGTCAT ACTGAAAAGA GCACAGGAGG TCTCAATCTT TTCTGTTGTG 000080
000081 TACTCGTTTT GCACGTAATC ATACAGTGGT GGGCCCATAG CTGTTGAATA TAAAATATAT TACAAACTGC CCAAATCAAT 000160
000161 TATTCTGCTA TAGCATATTC TTCCTGTCAA ATATATGCTC CTGTCTGCAT TCAtttttat ttatttattt attttAATAA 000240
000241 AAGACTGGCT GGCATTTCAT AGAAAGATCT AGAAAGCAAT GCCGTTTCAG TTTGCATGTC ATAGAAGCAA CTCCTCTTCA 000320
000321 GCCTATATGT CATGTTTTCT GTTTTATTTC TCTCGTTTTC TTATACCAGC AAATTGTCAT CTGCTCCCGA TGTTTATCCC 000400
000401 CTATTTAAAG ACACAGTAGC AGTTTGTGAA GCCAGCAGTT CTCTGCCAAT GCTGTCACAC ACACTCCTGT TCCCCCCAGG 000480
000481 TCTGTGGCTC TGAAGGCCTG ATCTTCAACA AGCAGTGACA CAAAACCACT ACTGTTCCAT CCAGAGGGAG TTGCTGCTGT 000560
000561 GCAGCGCATG TTACAGGATC AAGCCCCAAG TGAGGAACAT AAGAGAAATC ATAGAAGGCA AGTAAAATAG AAATGTGTTC 000640
000641 CTCATGCAAA CACTCCAAGC AATTAAAAAT AAAATGAAGG AAAGCATGAA CTAAAATAGA AAACTGTAGT GATGGAACAC 000720
000721 TTTTGAAATC AAAGATCGTG CTTCTTTCCT TACTCTCTGG AACTCTAAAT CATTACTTAG GTGAATTTAT GTCTGTTTTC 000800
000801 AACATTTCTG TTAAACACGA CAAAGAGCTG GACCCTAGTT GCTGGTTGCC AGGCAGGCTA CACCCCAGAA GGTCAGAATG 000880
000881 CATAATTAAT CCACGGGAGG CTGCAGGAGA TTTGTTATCT GGGAGCCTTT AGGTTCCCCA TGCACAGACT TCTGCATGCC 000960
000961 AGAGCAGGTT GCACCTAATA AAGTTTTCAA GGTGATTCTG ACTTTCTTCA CCACTCCTCA CCCCCAGCTT CCTCCTAGGC 001040
001041 ATTTCCAGCC TACTTATCCC AATATTTCAG GAAAGGCACG ATCTCCTTCA AACACCACA
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Predicted Small Protein

Name NONHSAT101866_smProtein_788:931
Length 48
Molecular weight 5245.9709
Aromaticity 0.0425531914894
Instability index 79.4106382979
Isoelectric point 6.69952392578
Runs 7
Runs residual 0.0173404255319
Runs probability 0.036931889873
Amino acid sequence MSVFNISVKHDKELDPSCWLPGRLHPRRSECIINPREAAGDLLSGSL
Secondary structure LLEEEEEELLLLLLLLLLLLLLLLLLLLLEEEELHHHHHHHHHLLLL
PRMN -
PiMo -