NONHSAT102891

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT102891

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1859 nt

Genomic location

chr5+:95768987..95770845

Exon number

1

Exons

95768987..95770845

Genome context

Sequence
000001 AGTGTTTACA CGTCAAATCG ACGAAAGCCA TCTCTTGACG TCAGATCTAC CTGGACTAAG ATCCGAATGG TATTCCCGGC 000080
000081 GGGGCGGAGA AGCGGCTAAA ATAAGCAGCC AGGGATTAGG AAAAGGAAGG AACTGTTTGC TGGGATCAGT TAAGTCTGCT 000160
000161 CCTTGTCTGC CCATAAATTC TGTACCGTGA GAAACATTTT CACTTTTCAA AGAGAAGTGC CCCACTTGAA CATAACTACC 000240
000241 AAGAATCAAA GGCTGGGAGT GCTTTCCCTC CCTTCCATCC ATTTTCTCTG TATTTACTTT ATTATCTCAT GTGTGTGGCG 000320
000321 GGGAGGGGGG GAGGCTATAG GATTCTTATA ATGGCCCTTT GGGCATCAGC ACCTGCTATG AAGAACAAGG CTCTTAGGTC 000400
000401 TTTCAAAGAG AGAGGCTAGG AGAGTAAGGA GAAGAAGGGA AGCTACTACT GTCCCAATTC TGTTCTAAAT TGTCTGAGAA 000480
000481 AATTAGCATG TCTATGTTAA AGCAATACTA TTAAAAATGA ATTTTTAACC ATTCAAGCCA CCTTAGTTTA CAAGTTTACT 000560
000561 TCCCTCCTCC CCTTTGTTTC TCAACCTCAG TAAAACAATA TCAGTAGTTA TACTCCGATA TTGCAAAGCC AGCGCCACCA 000640
000641 CCACCTTTTA GGGTGTTTAT CAGTAAAATG ATTAATCATG TGATTTTAAA AAAACATATT TTTAAGAATT CGTCAACAAG 000720
000721 GGGATCTAGG ATCCCAAAAG CTGTTGTGTT GATTCAGGGA GGGAAAGAGC AGTTTTTATT TACCTCGACT TTCCATTGTG 000800
000801 CCTCAGTAGA GCTCTTCACT TTGGTGCTGA GCTGGAGCTG TGCCATTACT TTCCCATAAA ATGCACAATG CCTCTTTGTG 000880
000881 GAAAAATGGT TTCCTGTGGG AGGAGAGCAA GGAAACATCT AAATGAATTC TCCACCCCTC ACCCTAGGGA AGTGAGTTCA 000960
000961 GTCTCCCATG GTGGAGCCTA TTCGAACCCT GAGGGATTGA ACCTGGCGGG AGATACCAGT GCCTAGTATT CAGCACCGAG 001040
001041 GTCTGGACAG CGACACACGC AGGACTGCCG CAGGAGCTGC TCTCTCTTCT GAGCACCAAA GACCTCCACC CTTCTGCAGC 001120
001121 TGGCCAGCAC CAAGCTGTTT TCCTTTTGAT ATGTGCATTT CCCTCTTTTG AACAGCAAAA TAGGAAATTG GCCGCAGGGG 001200
001201 GGAGTGTGGT TAGGTTCATG ATCGTGACAA CTTGTGTCCA GCTCTTGGGA ACGTGTTGGA CTCAGGCCAA AAGTAAAATC 001280
001281 GCCGGGAGGT GGAATTGAGA GAGTATGCTG CACCTGGGAA GTttgttttt ttttttgttg ttgttgttgt tgttTTTTAA 001360
001361 AGCTCAACCG CCCGAGGGCG CGATCTATGC TGTAGAAATA GAAGAAAGGG GAGAAGGTTG GAAAGAAAGC ATATAAACAA 001440
001441 GTGGAGAAAG GAAGCAAGAG ATGTTCCTTA CAAGAAGCAA ATGAGACAAG ACTTGGTGGA GGATCAGGCT CTGTAGTGCT 001520
001521 AATTTTTCAT TTGCCTCCAC GTTTGCAGAA ATGTGCACTA CATAATTTCT TTAAACATAA AGCATCTTTA CAAAATCAAA 001600
001601 TGCCAATGTT AATAAGCCAT GTGACATGGT TAAGTGTTTT ACAATAATGT AACTCACATG AGATGAAATG GAATGGGCTC 001680
001681 CGATTGATAG CTTTGTTGTC TGTTCTGTAA ATCCACATGT GTGAATGTTG ATGGCTGGGT AAGCTGTCTT CTTTTCCCTT 001760
001761 CACACCTCGG CCTGAGTTGT GGCCTCAAGC TCTCAAGGGT GTTTCATTCT CACAGCAGAC AGACACTAAC TGTGCACTAG 001840
001841 CAAGGCAAGA GAAGCCCAG
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Predicted Small Protein

Name NONHSAT102891_smProtein_1304:1435
Length 44
Molecular weight 4953.7923
Aromaticity 0.162790697674
Instability index 48.7046511628
Isoelectric point 4.75042724609
Runs 6
Runs residual 0.0177684870656
Runs probability 0.0511540952717
Amino acid sequence MLHLGSLFFFLLLLLLFFKAQPPEGAIYAVEIEERGEGWKESI
Secondary structure LLLHHHHHHHHHHHHHHHHLLLLLLLEEEEEEHHHLLLLLLLL
PRMN LHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLL
PiMo i??????????????????????????????????????????