NONHSAT103201

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT103201

Source

NONCODE4.0

Same with

,

Classification

sense

Length

577 nt

Genomic location

chr5-:111066339..111092926

Exon number

3

Exons

111066339..111066743,111071127..111071204,111092833..111092926

Genome context

Sequence
000001 AATCTGTCTT TCTAGCATGT TGCCCTTTTT CAACCACATT TGTGTTTCAG GTGTAGAGAG GAGAGAGAGT GAACAGGGAG 000080
000081 CGGGGCTTTT GTCTGTTTAT TACCCAGAAC TCTTTGTCTG GGTCAGTCAA GAACCATTTC CAAACAAGGA CATGGAGGGA 000160
000161 AGGCTTCCTA AGGGAAGACT TCCTGTCCCA AAGGAAGTGA ACCGCAAGAA GAACGATGAG ACAAACGCTG CCTCCCTGAC 000240
000241 TCCACTGGGC AGCAGTGAAC TCCGCTCCCC AAGAATCAGT TACCTCCACT TTTTTTAATC GTAACACCTC CATTTGTATT 000320
000321 ACATATGGTG TATGGGTATT GATGAGGTCA TGGTATCATA TATGGGATTT TTTTCTGTGT AAATCATCAA GTATAAGAAG 000400
000401 AAACTATGGG ACTCTGAGCC TTGCTTTAGA GAATTTACAG TGGACAAATA GGTGTCATCA AACCAGTTTT TAATCATTCT 000480
000481 GACTCAAGTG AAAACGCTCA GAATTTCACA CTGTGAATCC ACGTTTACAA CCCTTACAGG TGGGCCTTCA GGCCTGGTTC 000560
000561 GCTACAACAA TGTCTTC
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Predicted Small Protein

Name NONHSAT103201_smProtein_341:472
Length 44
Molecular weight 5297.9638
Aromaticity 0.186046511628
Instability index 58.9395348837
Isoelectric point 9.38165283203
Runs 7
Runs residual 0.0054873268879
Runs probability 0.015481868423
Amino acid sequence MRSWYHIWDFFLCKSSSIRRNYGTLSLALENLQWTNRCHQTSF
Secondary structure LLLEEEEEEEEEELLLLEEELLLHHHHHHHHHHHHHHHHLLLL
PRMN -
PiMo -