NONHSAT104484

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT104484

Source

NONCODE4.0

Same with

,

Classification

sense

Length

778 nt

Genomic location

chr5+:148631907..148638137

Exon number

2

Exons

148631907..148632400,148637854..148638137

Genome context

Sequence
000001 CAACATTTCC TGTCCCTTCT TGGCCCACTT TTCCTGAATC CTGCCCTAGG TCTCTTGCCT ACTGAAATCA GATACTCTCC 000080
000081 CTGGGCTTCA GAGACACTCT GTTGGCTTGC CAGTCACCAA ATATTAGACA CTTACATTCG GGAGGTCATG TGCCCATATT 000160
000161 ATTCCATGGG CACATGGCAA ATACCTCCAA GCTTATTCCT AGTAGTATTA GGGGACTCTC TTGGGCCTTG TCTTTTGAGA 000240
000241 GAAGGTATCT TAAGACTGCT GGGCAACCCC AAGAAGGGCA GATCCAGCTC TTCCTCCAGA CTTAATTTCT GGCCATTTCT 000320
000321 GGATAGAACA GAGAGCCCAG ACACAAAATG TACCTGAAAG GAACAAGCCC ACCACCCTCA CCCAAGCTGG AGACCACCCC 000400
000401 CCTTTCTCCT TAGATCTACC CTTATGAACT GCTGCTGGTG ACTACAAGAG GAAGAAACCG ACTGCCCAAG GATGTAGACA 000480
000481 GGACCCGTTT AGAGCGCCAC CTGTCCCAGG AAGAGTTCTA CCAAGTCTTT GGCATGACCA TCTCTGAGTT TGACCGGCTG 000560
000561 GCCCTCTGGA AGAGGAATGA ACTGAAGAAG CAAGCCCGGC TGTTCTAGGC AGAGGCTCTA TAAATATATA TGCATTTATA 000640
000641 TAAAGATATA TGTAAAATCT CTCTACTGAA GCTCGGTATA ATCCTCTCTT GTGTAATGGG ACACACTGCC TGCCATGAGA 000720
000721 CTTGCTTTTC TGTACTGTCA GGCAAGCCCA CGTCATCGAG ATATTTTTAT GCTCCTTA
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Predicted Small Protein

Name NONHSAT104484_smProtein_173:304
Length 44
Molecular weight 4866.5549
Aromaticity 0.093023255814
Instability index 42.1186046512
Isoelectric point 10.266418457
Runs 6
Runs residual 0.0177684870656
Runs probability 0.0331507978567
Amino acid sequence MANTSKLIPSSIRGLSWALSFERRYLKTAGQPQEGQIQLFLQT
Secondary structure LLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLHHHEEELLLL
PRMN -
PiMo -