NONHSAT104958
Revision as of 01:34, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104958 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
483 nt |
Genomic location |
chr5+:165332131..165332613 |
Exon number |
1 |
Exons |
165332131..165332613 |
Genome context |
|
Sequence |
000001 ATGACAAACA ATGGAAAAGA GGAGTGGCAC CTGGTGTATA TATATTTCCT TGGCCTTTTA GAAAACATGG AGTTGTTCCT 000080
000081 TTGGCCATGT ACATGCGAAT ATACAAGAAG GGTGATATTA TAGACATCAG GGGAATGGTA ATGGGTACTG CTCAAAAAGG 000160 000161 AATGCCCCAC AAATGTTACC ATGGCAAAAC TGTGTCTGCA GCATTACCCA GCATGTCACG GGCATTGTTG TAAACAAGCA 000240 000241 AGTTAAGGGC AAGGTTCCTG CCAAGAGAAG TAATGTGCAT ATTGAGCATG TTAGGCACTC TAGGAGCCAA GATAGCTTCC 000320 000321 TGAAACCCAT GAAGGAAAAT GATCAGAAAA GGAAGCCAAA GAGAAAGGTA GCTGGGTTTA ATGGAAAGAC CAGCCTGCTC 000400 000401 CACCCAGAGA AGCACACCTT GTGGGAAGCA ATGGAAAGGA GCCAGAGATG CTGAAACCTA TTCCCTATGA ATTCATAGCA 000480 000481 TAA |
Predicted Small Protein
Name | NONHSAT104958_smProtein_86:232 |
Length | 49 |
Molecular weight | 5357.4584 |
Aromaticity | 0.0625 |
Instability index | 49.1541666667 |
Isoelectric point | 10.012878418 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0290780977055 |
Amino acid sequence | MYMRIYKKGDIIDIRGMVMGTAQKGMPHKCYHGKTVSAALPSMSRALL |
Secondary structure | LEEEEEELLLEEEELLHHHHHHLLLLLLLLLLLLLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |