NONHSAT108047

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT108047

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

9048 nt

Genomic location

chr6+:21666104..22221713

Exon number

26

Exons

21666104..21666250,21666646..21666876,21668878..21669130,21756845..21757488,21783863..21783939,21798892..21799215,21802888..21802971,21821063..21821572,21909701..21909834,21979174..21979293,22020568..22020771,22056775..22056923,22063249..22063471,22110976..22111149,22131470..22131879,22134831..22135385,22146879..22147522,22149003..22149552,22149948..22150680,22174227..22174292,22181388..22181704,22185499..22186406,22191796..22191885,22194274..22194625,22195582..22196028,22221012..22221713

Genome context

Sequence
000001 CGGGAGAGGA GTTTCCTAAC ACTTGGAGCC CCTTTGAGTT GTTCTGTGTA TTGGGTGGAG GAGGGTGAAT CCGAGAGGAG 000080
000081 GGAGGAGGGT GAATCCGAGA GGAGGAAGGA GGATGAAGAG CCTAGCCTGC GCCCCACCTC TGATTGTAGA AACCTGCCGC 000160
000161 CGCTCGCCGC CTCTTTGTCT GCTCCGGGAC TTGGAACAAA AGGGGGAACT CTGATGAACT CTCTTTCCTC CCCTCTCCCC 000240
000241 CGGACGCCGG GGTATCTCCC TCTCGCAACT TTGCCGCCCC GACTTTCTCT GCTGTCAGGC CGGGAAAAAG TGTCCGAACG 000320
000321 CCTCGTGGAC TGCAGCGGGG GAAATGTCCC TTAAAAGTGC GACGAAGTGG GGAAGAAGGT GTAATTACTA TTATCAGCAT 000400
000401 CTAGAAAGCA TCATGAATTT GCTGGAGTAC TTCCTAGCAC TGACCTCCTT CATTCTGCGT TGTTCTTACT GGATCTTTCC 000480
000481 ATCAGCCAAC AATATGGAAG TACCAATACA AGGTCAAATC ATTCCTGGAT TCATCTGGAG TTGCTTAAAA GTTAAATCAT 000560
000561 TGGAATTTTT GATGATACCT TTTCTATATG GATTACAATT TGATCGCTGG GAATTCTCCA CCTTAAAGAA GATGACACTT 000640
000641 GTTTACATGA TTGAAGCTGA AACAAGAAGG CAGCGTGTCA CCTTGTTCAG CGTCAGCTGG GAATGTGTGT TGGGCAACTT 000720
000721 AGAACTTTCA CTGCTCTGTG CATGTTTGAG AAAGCAGGAA AGCACCATGC ATATTGATTT TGGGGTTACA CGTAAATTTC 000800
000801 TGCAAGTTAG GTGAATTTGC AAATACAGAA TCTGTAAACA GTAAGGTTTG ACTCTATTAA TGTCAATAAT AAAACATAAT 000880
000881 GAGAAAAATA TGAGATATTG CAATACACAG AATTCAAATA GGGCAATGGG AAGGTGCCTG GGGCGGGTGC TACAGATTGG 000960
000961 GAGGTCAGCT GAGGTGTCTC TGAAGAGGTT TCATCTAAAC TGAGATCTGG ATTACAAGGA GGAGCCTGTC CTGTGAAGAT 001040
001041 CAGGGGGAAG GGCATTTGAG GTGGGAGTGA GTACAGGCAG GGCAAAGGCT CCAAGACAGA ATGAGTTTGG TGTGAGGAAA 001120
001121 CCCAAAGAGA CCACTGTGGC TGCCAGAAAT GGAGAGCTTT GGAGGCAAGT ACAGGCCTGG TCACTAGGGC CTTGTCGGCT 001200
001201 GGAGTGGGGG TAAGGATTTG TGCTCAGTGA GTGATTCTTG CTATATTTCT CCGTAAATGT TGCGGCATTT TTTTCTACCC 001280
001281 TCAGGTGACT ACAGATGTGT TAACACCCAG CATGTTCCGG TAGGAGACTT TCTGGATGGG GAAGATTTCC AGGGGCTACT 001360
001361 GCCACCACAT TCATCTAATT TTCTATTTTT TATAGAGACA GAGTCTTGCT ATGTTGCCCA GGCTGTTCTT GAACTCCTGG 001440
001441 CCTCAAGTGA TCCTCCTGTC TCAGCCTCCC AATGTGCTGA GATTACAGGT GTGAGCCACC ACACCTGATC CTCTTCTGCT 001520
001521 GCTGGTTAAT AGTTACACGC TTTTCCTAAT GCTAATCACT GACAACTACT GATTAATCCA CACATTTTAT GTGTGCCTAC 001600
001601 TTTTAGAAAA CCCAGCCAAA CATCATACCT TCCTAGGTGC AAGAATCCTA TTTCCAACTT TTAAAATTCC CTATGGGAAT 001680
001681 TGGCAACAAG CTCATTTCAC TGGTGGGTTT GCTGAAGCAT TATCACAAGA CAGTCAGAAT GACTGATGAG TGCTCTTCAG 001760
001761 ACTGCAACCT CCGCCTCCTG GGTTCAGGTG ATTCTCCTTC TTCAGCCTCA CGAGTAGCTG GGATTACAGG CGTGCACCGC 001840
001841 CATACCCAGC TAATTTTTAC ATCTTTAATA GAGACGGGTT TTCACCATGT TGGTCAGGCT GGTCTTGAAC TCCTGATCTC 001920
001921 AGGTGATCCA CCTGCCCCAG CCTCCCAAAG TGCTGGGATT ACAGGCATGA GCCGCTGCAC CCGGCTCCAT TCCTTTTCTC 002000
002001 TGCGACAAAC CTGCGTGGTG ATAGGTCCAC TCCCTTGACT AGTTTAATTC TGAAGCTTAT TGATGGATTC CTCAAACAGA 002080
002081 TCTTGTGGAC CAAATTATTC TATTTTTCTG TAGAGCCTGG CGATTTGAGA TAATCTATCT GCACAGTTTT GTAGTGTTTG 002160
002161 CTTCCATCAC TCAAGAGTAA GACAATATGT CAGAGTTATC TTGATGGAGG GATAAGAGAG AGATAGTTTG GAGACAGAGC 002240
002241 AGAAAACCTT TCTAGTGTAC TTGGTAATGA GTGTGAATCA TGGCAATACA GTGAAAGACA GTGATTTACT GCTTTTGAGG 002320
002321 GCGTGCATGT ATATGATTAA CGGATGGAAG TGCAGGACTC CAAGATTTAC TTCCTTCCCT TTCCAGCAGA ATTACCTGAG 002400
002401 ACGAGTAAAA TCTACTGGTG GAGTCACTCC ATTATTCTTA TCTGTGGAGA TCTAGATCTT GATTTGAAAG TTTCTGAGAA 002480
002481 AATCTTCAGC TCAGACTTGA GGGTCAACTT TACCAGCTGA AGGTGATCTG CATTTACTGC TCAACCACAT CTAATTTGAT 002560
002561 GTCCTCTGCA GATTTAAAAT GTGTGCCTTC TTTTCCGTCA CCAAGTCATC CCTGGGTTAC TACTGAACAT CCTTCTCAAT 002640
002641 TCCCCCCGAC CCATGGATGG CTGTTCTCCA TTGTCTGTTT CACCAGATGT CCTCAAAACA AACAGACAGA AGAAGGAAGT 002720
002721 GGCTAATGGA GCTGTGGAGT CCAAGTGTGA CTGCCAAGAG GAATCCAGCA AAGCCAAAAA GCCCAAGCAT GTAGCCCTGC 002800
002801 CCGAAGCACG CCACACGCAT GGAAAACCCA GAGGAAATGA GTGAGGATCA ATGGGAAGAA GAGAGCCAGC CAGGTGAGTT 002880
002881 CGATGCCTTC TCCATCCGTC AGTGAGGGTG TGGAGAGCCT GCAGGCGTGT GCCTCCCTCT GTAACTTGCT ATTCCTTGTG 002960
002961 TAATGTCAAG TGGAAGTGTG AAGCACCACA AACTGCTCTG AGCAGAGCCC ACTTCCCTTC ACCCACGGAG AGCGTGAAGC 003040
003041 AGTTACACCA ACATCAATCA AGGAAAACCC ACAGGCTGAG CTCACACGGT TGAAGCAGGT GAAGTTGAAG ATTTGTCCAG 003120
003121 GAGCAGATAG CTGAAGAGAG AGAGAGAGAA GAGAGAACGG CTTACAGCTC AGGTCCTCTC TCCATGCTTA GGAACCACTA 003200
003201 CAAATGCTAC TGCCTTGAGT CTCATTTTGT TTCCCTCTGG AAACCACATG TGTACCTTGT TTGCAACAGT ATGGGCATTG 003280
003281 GATGGAGTGA AAAACATTCT TAGCTGAGAA AAACAGCAAG TGCGATGTGT CCGAAGTGAG AGGAACGTGG CATATGGAGT 003360
003361 CATGAAGGAA GGCAGGGATA GCCAAAGAGA AATAAGGAAA CCAATGGGTA TGAGAGCAGA GTGGAGCATA GGCAGGGCTT 003440
003441 GGATCTATTA CTGGTTTCTG TGACATGTGT TATGAAGAGT ATCATTTCAC TGACTGGCTC TGCCCAAATA TGTTTGACCA 003520
003521 TATTTACATC CCATCTCTCT CACTCTGGAC TGCTGAAGAA GCTTACACTA TCAACGTACT CCTTTTTTTT TTTTTTTTTT 003600
003601 TTTTTGAGAC GGAGTTTTGT TCTTGTCGCC CAGGCTGGAA TGCAATGGTG CGATCTCAGC TCACTGCAAT CGATGTACTT 003680
003681 CTCTTGCATC TCCATTAAAA ATTTCTTTAT TGTGTTAGTA TTGGATTATA ACCCAAAGTA TAAAAGAAAT ACCCATGAGT 003760
003761 CCATACTGAT ATAAAAAAAG ATCAAATAAA TAAATAACTG GGAGAGTGAG ATGATTTTCC TATGCAGAAG AATGCCAAAC 003840
003841 AAATTATGTA GATTTTCTGC TTACAAATGG GTGGAGCATA ACTTCCCACT CCTTAAATTT GGGATGCATA TAGTGACTTT 003920
003921 CTTCCAAAGA GTACAGTACA GAAAAGTGGG TGATGAGAAG AGTAACTTTA CAGTGAAGAA ACATGACAAA CACTACCACA 004000
004001 GCCAGGCAAT CAAAGTTCAC ATCAATAGTA TAAGGCATGC TGATGGTATG TACCTTTAAT ATAATTTGGT GAGAATGGTA 004080
004081 CTTCACCTCT GTGGTCTTCC TCCCCAAAAC CCATAACCCC AGTCAAACCC TAAGAAAAAC ATCAGCCAAA CTCAAATTTA 004160
004161 GGGCATTCTG CAAAAATAAC TGACTGACTA GTACTCCCTC AAACTGTCAG GGTCACCAAA AACAAGGAAA GTCTAAGAAC 004240
004241 CGTGGGCACG CAAGCTTCCC CTGGTTACCT GAGCTGCTCC TGCCGTCTCC CGCCTGGGCT TCGCCGTGGT GCACCCGATC 004320
004321 CCGGAATCGT GCGTCTGCGC CCTGCGAAAG AAGGACCTGC TGGCGGAGCT CCGGCCGGGG TCTCCTGCCT CGCAGCTGGG 004400
004401 CGAGGGGACT TGGAGGACAG GGTGAAGCTG CAGAAGACCT GGGGTGGGAT GGCTAGAGAG GACGCCAAGG ACTGGGGAAG 004480
004481 GGGAAGTTAG GAATACCTTA CATCCAATGC CCACCCGTGC TCCGCAGGGC AAGGGCAGCC GTCGCCTCGG CCGCGTGCAC 004560
004561 CCAGCTCAGG CTGTTCCCAG GGATTTAGTC TGGGGGGACA ACCCATGGCG AGATGTGGTG GCATTTTACC TCAGAGTGGA 004640
004641 GCTGAAGATG GATAAACAAG GTATCTGATG TATCTGCCTG AGAAGGCAGA GCTGGAGAAA GGCGGAGCGA GGGAGCGCGT 004720
004721 GAAAAGAAAG AGATGCCGAA TGCCGGGTGA TTGTCTGCCG CTTGCTGTGC ATTCTCATTC TAGGGAGGAT GGCATAATTT 004800
004801 ATAACCCAGC ACATGGATAG AGGAACTGTA AATTGTAGTC TGGATGTCCC CGGCGCTGTC GACGAAGGAA CTGATGGGCT 004880
004881 AGGTGAAGGC TGAATTATCA ATTTGTCAGG GGGGATATGT TCATTAAATG AAACTGTGAA CGCTTAAACA TGCAAATTAA 004960
004961 TCATGCGAGA AAATATCAGT GCAAGCTCTA TCAATACAAG ATGTTTTACT AAATAGCCAA AAATGGCACT GCCAGTCTCC 005040
005041 TATCTCTGTA TCCACACATA AATTTTTTTG TTTGTTTTTG TGCATTTCAA TAGAGAGAAG TCAAAAGTTA CATTCGAGTA 005120
005121 AATAGGGTAA ATTAAATTCT AAAATTCCCA CTTTAGAATT TAAAAAACAA CTAAGGAGTT TTGATTTTTG GTGATCTCCC 005200
005201 GAGTTTAAAC CTTGAAGGAG CTTTTGCTGT CTTGAAGCCA AACAGCAGCT AGTCAGTAAT CGTTATGGGA AGTCAGGGTA 005280
005281 CCACAGTTGT TGAGATTTCA AGGCCACGTT CACTTCCCTC CCTTGTCTCT TGTGCTTGGA GATTTGGGTG CTACTACAGC 005360
005361 CTCCACAAAG AGACAGTGGG AGGAGCTGAT TGGTCCGTAG GCTTAGAATG TTTACTCTTA TTTGTTTTCA GTGATTTTGT 005440
005441 TTGTGTTAGT TCAAACAGCT GGTCATTAAT GCAGTCCCCA TTTCTAGAGC GAAGTGCTGC TGGACATGAA TGCCCGCCTG 005520
005521 ATTAATGCTG CCCCTCCGAG GGTCCTTCAC CCAGCAGTCA TGCTCGCAGC AGAATAATGT AGCATGATGT GATTGCACTC 005600
005601 TAACAGGATA GTATGTCATT GTGTCACCAA GCAATTGAGG TTATTATGGG GCAGGGCAGA CAGACGGGAC AGTGGGGTTA 005680
005681 CTAGACCGTA GCATTTTTAG AAATACAGGC CTGACCTACT TAGAGTTATT CTCTCTGGCT GGCAGCTGCA TGGTACATAA 005760
005761 AGTCTCCTGA TAGGCTGAGT CTGTTGCTAG GGGGAATTAG CATGAATTTT TCCACACACA GACTCAGTGG CTGAATGATA 005840
005841 AAAGCTGACT GGAATTAAAG AGATTTGGTT TAGTATTATA CAGATTTATG TGCCTCCTTT TCTTTCTCAA GTGCAGAGAA 005920
005921 AGAGTGCAAA ACACAGATTT TGTTTCCATT TGTTCTTTGA CCTTCTTGTT CTCTCCCCCT CCCCTCAAGA TGCATGAGGG 006000
006001 GAGGAGGGCA GGGCAGTTAT GAAATTTTGG TTAATCTCTC ACTGTTGGGG TCACTGAAAC GATGTCGCAA ATTGCAAGAT 006080
006081 ATTTAAGCTT AAAAACTGTT GGGAATGACT AACAGAAGGT TAGATTATTT TTCCTCTTCT GTGCACTAAG CTGTTTTGAA 006160
006161 GTTGGGGCTC ACAGGCAGAA GGAATTTTCC TTGTCTTGGA TGAGACTTTT GACTTGGACT TTTGGGTTAA GGTTATAATG 006240
006241 TCTTCTTGTT TTGTTTCTGT TTTATTTTTG TCTTTTTTTT TCTTAGTTAA TCTAGCTAAT GGTATATGCT AGTCGATTCT 006320
006321 CGCACTGCTA TAATGAAACA CCTGAGGCTG GGTAATTTAT AAAGAAAAGA GGTTTAATTG GCATATGGTT CTGCAGGATT 006400
006401 TACAGAAAGC GTGGTGCTGG CATCTGATCA GCTTCTGGGG TGGCCTCAGG AAGCTTACAA TCATGGTGGC ATTTGAAGTG 006480
006481 GAAGCGAGAG AGAGAAGAGG AGATGCAACA CACTTTTAAA CAAGATTTCA GGAGAACTCA TTCACTATGC CTTGCTTGAT 006560
006561 ATCTGTGCAT TTAATGGAAC ATTCACGTCT TCCAGTTTTG TAGTGTGGCT TTCATGGGAA AAAACTTTCT TCTACAGATA 006640
006641 TGTCCTAGGG TGTCAGTTGG GTAGGGTGCG TTGGCTTTTC TTTGGGTGGG TGCAATAGTG TAGTCTTTGT ACAGTTTCTT 006720
006721 CAGCTATAGT CAACATCAGC AATGCCTGTG TGTGCCTCAA TGGCTTAGGC TGTAGAGATT TGTATGGCTA TTCCACCTAC 006800
006801 TTGGGCTCTG CTCCTCGGGG GGTTGGGTGC TGGGCTGGTC CACGCTTTGG AGAAGTGAGG GGCTGGTAAA TCAGTGGCTT 006880
006881 GAGTCAGCTC AGGCTCTGCT CCTCACATTA AATCTTGAAA GATGTGAATT TCATTACCTC TTAGTTACAT AAAGCCATAT 006960
006961 ACAAACTCTT TGTTGTTTGT TTTAAATCTT ATCTCTGACT TGGTTATAAA TGATTGCACT TTTCTACTAT TTCTAACTAC 007040
007041 AGTATAGCAG TGCTGAAACA TCTGGGGGGC AAAAGAAAGT TAGATAGGCT AGTAACACCA AAGTAATGCT GAAACCTGGA 007120
007121 AGGAAAGAAA ACACATTACT TTCCTCTCCA TTCTTCTTTG CTCCCCTTTG AATATATGCT TATTATAATA GCAAGCTGTG 007200
007201 TGACCTTGAG CCATTTATTT GTCTGGAGCC ACAGCTTCTT TACTTACAAA ATAAAGTTAA TGCCATTTAC ATCTCAGAAA 007280
007281 TTGTGAATAT ACATGAGAAA TATGTTTATA AAATCTCATG ATATGCTTGT CACACAGTAA GGTTTGGTAA AGTGAATCCT 007360
007361 TCAACAGCGT TCCCCAATTC TTTCTCTTGT GCTGAAAGTG GACTATCTAT CTTAGAAAAG ACCATGCAAA CCAAAATAGA 007440
007441 ATGACTTGGC TACAGAGTTC TGGAGACCAG AAGGCCAAAA TCAAAAGTAT GGGCAGGCTT GATTTCTTTA GAAGACTCCA 007520
007521 GCGGAGAACT GTGTCTCCTT GCTTCTGATT CTACATCTCC ATCCATGGGC CACTGTTTCA GCAACCTCAG CCAGTGCAAC 007600
007601 ACAACCTCAG CCAAGAAGAG TATGCAGAGA AAGGAGTCCC CTACCTGCCA CAAAACTGTT GTCTGAAAAC TGTCTCATAT 007680
007681 TGTCTCAAGT TGTCATTCAT TGTGAATTAG ACCTGTTTAA CATGTAATCT GCAACATGCT TCACTGTCTA ATTTTCCAGA 007760
007761 GCCCCTCATA TAAGGAACTG TATTATTGGT ATAATCATCA TGGTGAAGAA GTTGGTATGT GGGGGAGAGA TGACAGAAAC 007840
007841 AGAGAGTAAG TCAGAGCTGG CTGCCTGACA GATAAAAAGG AAATGACCAA AAAAAAAAAC TGCATGTAAG TGGCAAAGAT 007920
007921 GACTGTCTGA AAATATATAC CTACTTTTTT AAAGGGCTAT CTCAAGCCAT TCTGGAGAAG CACCAAAAGC CACTTTGCTT 008000
008001 ATACTGGGAG AATAGTTTGC TTTCCCTAAT TTGTGATGAG TGAAACACTG AACAGAGACA TAGAATAATA TTCTGTAGTT 008080
008081 CAGGGTTGGT GTAATATGGC CAGTGGGCGG AATCTGGTCC TCAGACTGAT TTTGCAAATA ATCTTATAGA AACACAGCAA 008160
008161 CACCCATTCA TTACATGTTG TTTATGGTTG CTTTGGGGTT ACAATGGCAG AGTTGAGTAG TTGTGACAGA GATCACTAGG 008240
008241 CTCACCACAT CTGAGATATG TACTGACTGA CCCTGTACAG AAAGTTTGCT GCTCTTAGAG GAATGTGTGT TTCTAGTGTC 008320
008321 AGCAATAAAC TTCTTGGATT TGTTTTTTTT TTTTTTTTTT TTTTTTGGTA GAGATGGGGT CTTTCTGTGT TGCCTAGGCT 008400
008401 GATCGCAAGC TCCTGGGCTC AAGTGATCCT CCCATCTTGG CTCCCAGACT GCTAGGATTA CAGGCACGAG ACACTGTGCC 008480
008481 CAGGCCCAAA TTCTGTACTT CTCCCAGCTA TTGTGAAGCC TCCGACATGG TCTGTTCTGA TTCTGTCACC TTTCTCTTCC 008560
008561 TTCTCAAGCC CCAGTAGGGG CCTTGCCTCT CCAGCGTACC CTGCTTTTGG AGATCTTGCC TCCATGTTTC CATTATTGAT 008640
008641 GGAGGGACCG TGGCAGGACT TTGCTTTCCA ATGTCACTAT TATGTCAGCA GGCTAGCCCT GAACCCCACA CAGTAAGACC 008720
008721 CCTTATGTGA GGGTTTTACA CCTACTTGAT CTTATTCCTC TTTCCAGGTG AGCACCACAC ACTGACCTAG CTAGGCTCAG 008800
008801 GGTAAGGTAG CTCTTGCTCA TTTTGGCCAG GTATTTAATT ACGTGACATT CACAGTGTGC CTTTCTACTT ATCTTTTTAT 008880
008881 CCTTTTCAGT TCAAGAAACG TGGCTATACC AACTTGCCAC AGTGCCCATC CCACTTTGTA GAAGACTTTG ATATCTGACT 008960
008961 CACAGAGAAA CTCCTGCCAG GAGTTTATAT TGTGTGCAGC TGATTCAGGC AGTAACTTCC ACTCAGCGAG GGGGTCCATT 009040
009041 TACAAAAA
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Predicted Small Protein

Name NONHSAT108047_smProtein_5264:5524
Length 87
Molecular weight 9421.6184
Aromaticity 0.116279069767
Instability index 65.2686046512
Isoelectric point 5.14361572266
Runs 15
Runs residual 0.034796945505
Runs probability 0.0495672142732
Amino acid sequence MGSQGTTVVEISRPRSLPSLVSCAWRFGCYYSLHKETVGGADWSVGLECLLLFVFSDFVC
VSSNSWSLMQSPFLERSAAGHECPPD
Secondary structure LLLLLEEEEEELLLLLLLLHHHHHHHLLEEEEELLLEELLLLLLLLEEEEEEEEEEEEEE
EELLLHHHHLLLHHHLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHH
HHHHHLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTT
TTTTTooooooooooooooooooooo