NONHSAT108329

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT108329

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

876 nt

Genomic location

chr6-:27001214..27002089

Exon number

1

Exons

27001214..27002089

Genome context

Sequence
000001 TTCCTTTTCC TTACTGGACC TGGATTTGTG GGAAACTTCC TTATATTTAT AAGACATGTA TATTCTTTTG TCATGAGTTC 000080
000081 TGAGAAAAAG CACATAGAAC TTATCCTTCT TCATTTGGTT TTCTCAAATG TAATCATTAT TTATAGCATA AGTAGCAGAA 000160
000161 ATATAACTGC AGTTTTTAAT TTCAGAAACT TCCTAGGTAA TGTTGGTTGT AAAACTTCAG TTTATTTAGG GAGGGTTGCT 000240
000241 TGGGGCCTTT CCATCTGCAC CACCTGTCTC CTCAGCATGG TCCAGGCCAT CACCATCAGT CCCAGGACCA CCTTGTGGAG 000320
000321 AAAGCTCAAA CTACGGATTG CATGGCAAGT TCTTCCTTAT CTCTTCCTCT TTTGGATCTT TAATGTTCTG ATAAGCTCCA 000400
000401 ACTTGCTCTA CTACATTAGA GCAGTTAATA GCATGAATAG GTCTGAAATT AGACCACATA TTAGTTGTTG CTATATGCTA 000480
000481 CCATCTAAGC AAATAGTTAG GTGGTTTTTC TCACTCTTAT GGCTCTTTGG GATATCATCT TTCAGAGTCT CATGGGCTGG 000560
000561 AGCAGTGGGT ACGTGGCTTA TCATCTGTAT AAATATCACA ATTGTGTCTC CTACCTTCAG AGCTCCAGGT TTGCAAATAA 000640
000641 TTCCAGCCCA GAGGTCAGAG CTACTTAAAG TACTTTCATT CTCATGACCT GTTTCCTTTT CTTTTATTGG GCTGATTTTA 000720
000721 TTTTCTCCTT CTATATAGGT TCCATCTTGA CAAATGATTC TGCTGTATTA ATTATTAAAC CATTTCTAAT GTTTGGTTAT 000800
000801 GCCAGTCTCA GCCCCTTTGT GCTGATCAGC AGAGATGTCT GCATTGCTAA ATGCTGGAGT GCTCACCTAG GAAACT
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Predicted Small Protein

Name NONHSAT108329_smProtein_518:667
Length 50
Molecular weight 5693.3638
Aromaticity 0.183673469388
Instability index 78.5
Isoelectric point 7.92742919922
Runs 9
Runs residual 0.0216216216216
Runs probability 0.0350546625057
Amino acid sequence MALWDIIFQSLMGWSSGYVAYHLYKYHNCVSYLQSSRFANNSSPEVRAT
Secondary structure LHHHHHHHHHHLLLLHHHHHHHHHHHLLHHHHHHLLLLLLLLLLEEELL
PRMN -
PiMo -