NONHSAT112136
Revision as of 01:51, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112136 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
734 nt |
Genomic location |
chr6-:34392053..34393827 |
Exon number |
3 |
Exons |
34392053..34392617,34392849..34392998,34393809..34393827 |
Genome context |
|
Sequence |
000001 GGACCCTGCA GCCGCAGAGA TGTTGATGCC TAAGAAGAAC CGGATTGCCA TTTATGAACT CCTTTTTAAG GAGGGAGTCA 000080
000081 TGGTGGCCAA GAAGGATGTC CACATGCCTA AGCACCCGGA GCTGGCAGAC AAGAATGTGC CCAACCTTCA TGTCATGAAG 000160 000161 GCCATGCAGT CTCTCAAGTC CCGAGGCTAC GTGAAGGAAC AGTTTGCCTG GAGACATTTC TACTGGTACC TTACCAATGA 000240 000241 GGGTATCCAG TATCTCCGTG ATTACCTTCA TCTGCCCCCG GAGATTGTGC CTGCCACCCT ACGCCGTAGC CGTCCAGAGA 000320 000321 CTGGCAGGCC TCGGCCTAAA GGTATGGTTC CCACACAAAT CCCTTCAGCT ATTTGAAGAT AGTTTCTTTT GTGTAAGGGA 000400 000401 CAAAAGCATT CTTAGCTGAT GTCAGCTTTA GAGGGCTCTG GCCTGCAGGC ATTTGGTCAA GTGCTAGAAC CTTTGTCCCA 000480 000481 TGGCTTGGGA CTTGGAATAG AACTAGACTC AGTTCTTCAG GCCATCCATG AGATGGCCTT AAGCACAGAT AGTCTGTCAC 000560 000561 TTTCTTCACC CACACCTGTA CAAACATCCA GATACATGTG GTATAGAATA TTGAGTAACT TTTCCCGCAG AGTGCGTTGT 000640 000641 ACTATTCCCG AGAAGTCCAA AGCAAAGCCA TTTACCACCT CGAAAGAAAC AAGAGTGTTG TAGTTTTCTT GCCAACAGGA 000720 000721 GAAGAAATTA GAAA |
Predicted Small Protein
Name | NONHSAT112136_smProtein_236:418 |
Length | 61 |
Molecular weight | 6841.1433 |
Aromaticity | 0.116666666667 |
Instability index | 55.6383333333 |
Isoelectric point | 9.74578857422 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.047349488526 |
Amino acid sequence | MRVSSISVITFICPRRLCLPPYAVAVQRLAGLGLKVWFPHKSLQLFEDSFFCVRDKSILS |
Secondary structure | LEEEEEEEEEEELLLLLLLLHHHHHHHHHHLLLLEEEELLLLLLLLLLLEEEEELLEELL |
PRMN | - |
PiMo | - |