NONHSAT112714

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT112714

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1020 nt

Genomic location

chr6+:41105829..41108503

Exon number

6

Exons

41105829..41106080,41106347..41106464,41106878..41107075,41107448..41107517,41107594..41107807,41108336..41108503

Genome context

Sequence
000001 GATATTCTCT TTATAAATAG AGCTATGAAG AGATTTAAAG GATGTTAGGC TGCTTTGAAG GTGTAAGACC CCTTCCTTTC 000080
000081 CTACCCATCC TCCTCACTCC CTAGCTGGTC CCAGTGGCTC TCTCTCTCGG CAGATTTGGT CTGTGTGTCC ATGTACTGGA 000160
000161 GAGTCAGTGG GCGCTCATTT CTCAGAGTTA TGATGTCCTT GGCCTGGCCT GCTTTTACTC TGCTTGCTTA GATCTGCTGC 000240
000241 TCTATGGAAA AGGATTGCTG TGTCGGCCCT TTAGTGAGTG TCTGCGTTTC GTTCAAGTCT ACGAGCACAG CCGTGTTCTA 000320
000321 ACCTCTCAGA GCAATGTCAT GCTGGGGGTC CACTCCTCCC TGGCCATGTG GTTTGCCCAG GAATCACAGT GGGACCTGTT 000400
000401 TAAGCACTAT TTCTCCAACG CTTGCAGTTG GTGAAAAGAA CCAATGCCTC GCTATTTGGT GCACATGGCT TTGTCCGATT 000480
000481 CCTAGAATGC CATGTGTTAA TGTTACAGAA AATGCCAGAG GGTATCTTCA TGCATATTCC TCTAGAGCTT CACAGCCAAA 000560
000561 CCCTTGAGGC TTATTTTGCC ATCAGTAACT CCTTCCTGTT CCCCCAGCCA TGAGTGAATA TGCTGAATGA GGACCTTTTA 000640
000641 CTGTAAGGAG TTCTTCTCTC AATGTGTGAC CTGCCCTGTC TATCACCAGT GGGTATCTGA GCTTAAGGCC TCTGTAATGA 000720
000721 GATGTGAAAA GAGAGAATTG ATGTCCCTGA CTAACAGCAT CAGACCTTTT GACACCTGCT TGACCAGGAT TTGGATAAAA 000800
000801 GGAGAATTTC TGCAGGAAAA TAACTCTTAG AAAAGAAACT TAGGAATACA GAGATTTGAC AGAGTGGCTG ATGTCAAGGA 000880
000881 GAACAAGGAT GCAGAAGAAA CTCAAGATGT ATGTATTAAA ACAAAAGAAC AATAACCTGA AGGGACCATG ATTCTGTTAT 000960
000961 TGTATATAAC ACAAGGAAAT GCCCCAGATT CTCCTTTAAA AGATATAATG TACATATTAA
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Predicted Small Protein

Name NONHSAT112714_smProtein_626:829
Length 68
Molecular weight 8061.3045
Aromaticity 0.134328358209
Instability index 41.953880597
Isoelectric point 8.35028076172
Runs 12
Runs residual 0.0357896381965
Runs probability 0.0485706294531
Amino acid sequence MRTFYCKEFFSQCVTCPVYHQWVSELKASVMRCEKRELMSLTNSIRPFDTCLTRIWIKGE
FLQENNS
Secondary structure LLEEEHHHHHLLEELLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEEEELL
EELLLLL
PRMN -
PiMo -