NONHSAT112721
Revision as of 01:52, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112721 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
646 nt |
Genomic location |
chr6+:41107390..41108503 |
Exon number |
3 |
Exons |
41107390..41107517,41107594..41107943,41108336..41108503 |
Genome context |
|
Sequence |
000001 TACAGCTCCC TCCAGCCCTT CTGAGTCTAA AACACATTCC AATTCCTCTG TTTTCCAGGC TTATTTTGCC ATCAGTAACT 000080
000081 CCTTCCTGTT CCCCCAGCCA TGAGTGAATA TGCTGAATGA GGACCTTTTA CTGTAAGGAG TTCTTCTCTC AATGTGTGAC 000160 000161 CTGCCCTGTC TATCACCAGT GGGTATCTGA GCTTAAGGCC TCTGTAATGA GATGTGAAAA GAGAGAATTG ATGTCCCTGA 000240 000241 CTAACAGCAT CAGACCTTTT GACACCTGCT TGACCAGGAT TTGGATAAAA GGAGAATTTC TGCAGGAAAA TAACTCTTAG 000320 000321 AAAAGAAACT TAGGAATACA GAGTAAGCAT TTCTTCCTGG AAGCCTTGTG TGAGAGACAT AAAGACAGTC TCAGATTCTT 000400 000401 ACTCACAAGC AGTCAAAGGC TGCACCTCTG AAATAAAAAG GGACACACAG ATGTAAGGAG TTAGTCCTTG CTCCAGAGGA 000480 000481 TTTGACAGAG TGGCTGATGT CAAGGAGAAC AAGGATGCAG AAGAAACTCA AGATGTATGT ATTAAAACAA AAGAACAATA 000560 000561 ACCTGAAGGG ACCATGATTC TGTTATTGTA TATAACACAA GGAAATGCCC CAGATTCTCC TTTAAAAGAT ATAATGTACA 000640 000641 TATTAA |
Predicted Small Protein
Name | NONHSAT112721_smProtein_116:319 |
Length | 68 |
Molecular weight | 8061.3045 |
Aromaticity | 0.134328358209 |
Instability index | 41.953880597 |
Isoelectric point | 8.35028076172 |
Runs | 12 |
Runs residual | 0.0357896381965 |
Runs probability | 0.0485706294531 |
Amino acid sequence | MRTFYCKEFFSQCVTCPVYHQWVSELKASVMRCEKRELMSLTNSIRPFDTCLTRIWIKGE FLQENNS |
Secondary structure | LLEEEHHHHHLLEELLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEEEELL EELLLLL |
PRMN | - |
PiMo | - |