NONHSAT112721

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT112721

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

646 nt

Genomic location

chr6+:41107390..41108503

Exon number

3

Exons

41107390..41107517,41107594..41107943,41108336..41108503

Genome context

Sequence
000001 TACAGCTCCC TCCAGCCCTT CTGAGTCTAA AACACATTCC AATTCCTCTG TTTTCCAGGC TTATTTTGCC ATCAGTAACT 000080
000081 CCTTCCTGTT CCCCCAGCCA TGAGTGAATA TGCTGAATGA GGACCTTTTA CTGTAAGGAG TTCTTCTCTC AATGTGTGAC 000160
000161 CTGCCCTGTC TATCACCAGT GGGTATCTGA GCTTAAGGCC TCTGTAATGA GATGTGAAAA GAGAGAATTG ATGTCCCTGA 000240
000241 CTAACAGCAT CAGACCTTTT GACACCTGCT TGACCAGGAT TTGGATAAAA GGAGAATTTC TGCAGGAAAA TAACTCTTAG 000320
000321 AAAAGAAACT TAGGAATACA GAGTAAGCAT TTCTTCCTGG AAGCCTTGTG TGAGAGACAT AAAGACAGTC TCAGATTCTT 000400
000401 ACTCACAAGC AGTCAAAGGC TGCACCTCTG AAATAAAAAG GGACACACAG ATGTAAGGAG TTAGTCCTTG CTCCAGAGGA 000480
000481 TTTGACAGAG TGGCTGATGT CAAGGAGAAC AAGGATGCAG AAGAAACTCA AGATGTATGT ATTAAAACAA AAGAACAATA 000560
000561 ACCTGAAGGG ACCATGATTC TGTTATTGTA TATAACACAA GGAAATGCCC CAGATTCTCC TTTAAAAGAT ATAATGTACA 000640
000641 TATTAA
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Predicted Small Protein

Name NONHSAT112721_smProtein_116:319
Length 68
Molecular weight 8061.3045
Aromaticity 0.134328358209
Instability index 41.953880597
Isoelectric point 8.35028076172
Runs 12
Runs residual 0.0357896381965
Runs probability 0.0485706294531
Amino acid sequence MRTFYCKEFFSQCVTCPVYHQWVSELKASVMRCEKRELMSLTNSIRPFDTCLTRIWIKGE
FLQENNS
Secondary structure LLEEEHHHHHLLEELLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEEEELL
EELLLLL
PRMN -
PiMo -