NONHSAT112888

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT112888

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

720 nt

Genomic location

chr6+:43350113..43350832

Exon number

1

Exons

43350113..43350832

Genome context

Sequence
000001 atcctcccac ccctcagcct cccaagtagc tgagactata ggtatatgcc accacaccct gctaattttt tgtacttttt 000080
000081 gttgggactg gattttgcca tgttccccag gctggtcttg aactcctggg cccaagagat tcccttgcct cagcctccca 000160
000161 aagtgccggg gttacaggtg tgagctacca cgcccagccA CAAGTGTAAC TGTAATAGGT ACCACCTCAC CTATATATCT 000240
000241 CATCCCCACC CTTGTATATT TTTGGTTATG AGAGAAATGC TCCACATCGT TGGTCACTAT TTCAGAGCTT ATGTCACATT 000320
000321 CTGTAGGATA CCACTCTAAT Cttttttttt ctttctttct ttgagacaga gttttgctct tgtcacccag gctggagtac 000400
000401 aatggtgcga ttgcggctca ctgcaacctc cagctcctgg gttcaagcta ttcttctgcc tcagcctccc gagtggctgg 000480
000481 gattacgggc atgtgccaaa cacgcttggc taattttgtg tttttagtag agatggggtt tcaccatgtt ggtcaggctg 000560
000561 gtctcgaact cctgacctca agtgatccac ccgccttggc ctcccaaagt gctgggatta caggcgtgag ccaccgtacc 000640
000641 cggcTGATAC CGCTATGATC TTATGAGATG TTGTCTCCAG TTGGCAAAAT AAAAACTAAG ACCTCAGTAA GCCTATTCTA 000720
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Predicted Small Protein

Name NONHSAT112888_smProtein_401:526
Length 42
Molecular weight 4677.6058
Aromaticity 0.0975609756098
Instability index 71.9707317073
Isoelectric point 9.68829345703
Runs 7
Runs residual 0.00523716893611
Runs probability 0.0203018144195
Amino acid sequence MVRLRLTATSSSWVQAILLPQPPEWLGLRACAKHAWLILCF
Secondary structure LEEEEEELLLHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHL
PRMN -
PiMo -