NONHSAT113544

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT113544

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1444 nt

Genomic location

chr6-:73983862..74020088

Exon number

5

Exons

73983862..73984877,73985132..73985279,74001721..74001763,74019275..74019451,74020029..74020088

Genome context

Sequence
000001 CTTGGACCGC AGGGAGGGCA ACCAAATGGC AGAGGCGGTA ACGGAGAGCA TCCCTGAACG GCCAGAAACG CGAAATGCTG 000080
000081 TCGGCCTTCC AGAGGCTGTT CCGAGTCTTA TTTGTGATTG AAACAGTCTC AGAATACGGA GTCCTGATCT TCATTTATGG 000160
000161 ATGGCCCTTT CTCCAGACCC TTGCGATGCT CCTGATCGGG ACAGTGTCTT TCCACCTTTG GATCCGCAGA AATCGAGAGA 000240
000241 GAAACTCAAG GAGCGGAAAG ACTAGATGCC GATCCAAAAG GTGACCAGCC ACCAAGTAAA GCACTGATGG TTTCAGAATG 000320
000321 TGCCTAAACC TGCACCAGTG AGGCAAGTAT GCAAAAGGAG TCCCTTTCCG GGATGGACAC ACTTCCCATA GAGCCGTGTC 000400
000401 ACCCCGCACA GGGTTGCAAC CAGGCTGGTC TCAAATTCCC AACCTCAGGT GATCTGCCCG CCTGGGCCTC CCAAAGTGTT 000480
000481 GGGATTACAG GCATGAGCCA CTGCACCCGG CCTCAGACTG GGATCTGAAA TTAGAGAGAA TCCCTTGTGG ACTGGGGACA 000560
000561 GGACAAGACT GCTCTAGATT GGCCCATGGT GCCAGGTTAG TTCCTTCTGT AAGCTCCACC TCCTCCAGGG GCACCCGCTA 000640
000641 ATTGGCTCCC TCAGATCCTG GCTAGCCAGT ACAAGGCCTC AGCAGTGCAC AGATCCCATC TCCAGCCAGT CCAGGTGGCG 000720
000721 CTCGCATGGT AGGGTGCATG AACCTGTGTT GGAGTACAGG CCTTCTTTGC TCCAGTTGTT TCCCAATAAT AAATGTTATA 000800
000801 AAATTATCAA AGGCACTGTA TTAGTCTGTT ATGCTGCTAC ACGAGACTGG GTACCTTACA AAGAAAAGAG GTTTAATTGA 000880
000881 CTCACAGTTC CACATTGCTG CGGAGACCTC AGGAAACTTA CAATCATGGC GGAAGGCACC TTTTCACAAG GTGGTAGGAG 000960
000961 AATGAATGAG CGCCAGTAGG GGAAATGCCA GACGCTTATA AAACCATCAG ATGTCGTGAG AGTCACTCAT CACGAGAACA 001040
001041 GCATGGGGGA AACTGCCCCC ATGATCCGAT TACTTCCACC TGGTCTTGCC CTTTACATGT GGGGATTATT ACAATTCAAG 001120
001121 GTGAGATCTG GGTGGGGACA CAGAGCCAAA CCATATAAGG CACACTGCTC ACCAACATTA GGTAGAGTTC ATACATTTCT 001200
001201 TTCTCTCAGC AATGGACAAT GGATACATTA GAATGAGGAT GATTGCTGCA ATGCTAACCA GCTAATAAAT AGAAGTGGAC 001280
001281 TGGGATGAGA GTCCAGGCAA TTGCCTAATG AGCCCCGCTA TACATATTTG CAAAAATGTA GAATGATGCC ATTCTTTTTT 001360
001361 GTTTTGGCAA ATAGTTATTT TTCATTAAAA ATGTAATGTT ATGTTAATAT TGGATAAAAA TTGATTTAAT AAAAATGTTA 001440
001441 TAAC
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Predicted Small Protein

Name NONHSAT113544_smProtein_74:283
Length 70
Molecular weight 8266.7227
Aromaticity 0.144927536232
Instability index 58.9594202899
Isoelectric point 11.6504516602
Runs 12
Runs residual 0.0345817190415
Runs probability 0.0694812459519
Amino acid sequence MLSAFQRLFRVLFVIETVSEYGVLIFIYGWPFLQTLAMLLIGTVSFHLWIRRNRERNSRS
GKTRCRSKR
Secondary structure LHHHHHHHHHEEEEEEEELLLLEEEEELLLHHHHHHHHHHHLLEEEEEEEEELLLLLLLL
LLEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
LLLLLLLLL
PiMo oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii
iiiiiiiii