NONHSAT113694
Revision as of 01:56, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113694 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
474 nt |
Genomic location |
chr6+:80186733..80187741 |
Exon number |
3 |
Exons |
80186733..80186840,80186976..80187073,80187474..80187741 |
Genome context |
|
Sequence |
000001 TGTTTAAAAC GGAGCTACTC ATGAACTCCT ACCTTCTAAA TCTGTTTTTC TTATAGTTTC CATTTCAGTC AGTGTCCCTG 000080
000081 TCATCTCCTC AGTTACTGGG GGCTTCTTTC AATCCATCTT CTACATTAGT ATAGAAGTGC CTGTTTCAAA ATGAAAATCT 000160 000161 TATGTCATAC TGCCATCTAA AAATCCTCTT ATTATTTCTA GTAAATCAGA ACTTTTTCAG CTTCAAATTC ATATACATTG 000240 000241 AGCAACGCAA AGAAATACTC TCCCTAAAAT AAAAATGACT AATTCTCCAT CTCCTAATTG TTATTCAAAA CACATTCTTT 000320 000321 ATAAGTATAC CTAAACACAT TTTTGCAATA CTAAAAGCAT CTGGAGATAT ATAGCACTTA CCTTGCTATT AATTTAAATG 000400 000401 CAATCCTCAG CTGTATTTTT ATGAATTAAT AAAAATGTTA TTTGGGCAAT CTGGGTTTTG CAGTTAATCA AGAG |
Predicted Small Protein
Name | NONHSAT113694_smProtein_161:271 |
Length | 37 |
Molecular weight | 4468.3719 |
Aromaticity | 0.194444444444 |
Instability index | 47.0694444444 |
Isoelectric point | 9.42999267578 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0296136472608 |
Amino acid sequence | MSYCHLKILLLFLVNQNFFSFKFIYIEQRKEILSLK |
Secondary structure | LLHHHHHHHHHHHHHHLHHHHHEEEHHHHHHHHLLL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii |