NONHSAT113726
Revision as of 01:56, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113726 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
443 nt |
Genomic location |
chr6+:81150447..81150889 |
Exon number |
1 |
Exons |
81150447..81150889 |
Genome context |
|
Sequence |
000001 GAAGCACTGT ATGGAGAGAA AACTGTGCGC CTGCCAACTG CCTGCCGAAG GACCTGGGCT TTAATTTTCT TGCCATTTCA 000080
000081 ATCCCAATCT TTCTTTAGGA GACTGATGAT AAGGTTCGGA GTGGACTCTT TGTTTGATGG CTTTCTAATA TGGAGACAGT 000160 000161 TCCAAGAGAG CCAGGATTAA ATTGGCCAAC TTCATGCACA TGTGTGACCC AACCCAAATT ACAGTCCAGG TGGCTGGTGG 000240 000241 TGAAAGCCAA CTCATTAACC TACAGTGACA CCTGTTCATC TGACACACCT TTCCTGAGCT CAAAAGGTCT ATTTCTTTTG 000320 000321 AAATATTTAT GGCTCTGAAA CTAAAGGTCA TTCCATTCTT GTCTTTAACT TCACATGATG GTTAAAACAG ACACTTAAAA 000400 000401 TAATAAAATC ACCTTTAAAG GCAGAGAAGA AACATACAAA GAA |
Predicted Small Protein
Name | NONHSAT113726_smProtein_149:337 |
Length | 63 |
Molecular weight | 7039.0929 |
Aromaticity | 0.112903225806 |
Instability index | 55.3725806452 |
Isoelectric point | 8.56903076172 |
Runs | 11 |
Runs residual | 0.0237788018433 |
Runs probability | 0.0309614427262 |
Amino acid sequence | METVPREPGLNWPTSCTCVTQPKLQSRWLVVKANSLTYSDTCSSDTPFLSSKGLFLLKYL WL |
Secondary structure | LLLLLLLLLLLLLLLLEEELLLLLLEEEEEEEELLEEELLLLLLLLLLLLLHHHHHLHHH HL |
PRMN | - |
PiMo | - |