NONHSAT113903
Revision as of 01:57, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113903 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
542 nt |
Genomic location |
chr6+:88138030..88159238 |
Exon number |
4 |
Exons |
88138030..88138149,88141899..88142147,88158217..88158312,88159162..88159238 |
Genome context |
|
Sequence |
000001 ATTTTTCCCT TGGTTTTTTG AGGTGAAGAG TCCATAAATC TTTCTTAGGT GATCACATGT GTTTGGCTTT TTAAAGTAAA 000080
000081 CTAACTTTAT AATAATCGTA CTAAAATAAA ATGCTTTGAA ATGTTTCACA ATTGGGTATT TTTTCATTAA AAATAACTAT 000160 000161 TGGGATTGTG GGTATACAGG CTAGAGAGAA CACACAATTG GCTCATTTAA AAAATGTTAT TACATTTTTG ATAATGGGAA 000240 000241 TAACAAAATA TTTACTGTGG GAAGTTGAAA GTAATATTCT GAGGCCCAGT GAGGGTCACT GATACTGGGG AGAAAACAAT 000320 000321 CAAGAGCCAT GCAGAAGTAA AATGCAATGG AATGTAGATA GTTTCCTTTT GTGTTGGGAA CATTCAGAAT CCTCTCCTCT 000400 000401 GGCTATTTTG AAATATAAAA TAAATTTTTG TTAACTATAG TTGCCCTACT GTGCCCTAGA ACACTAAAAA AAAAAAAAAA 000480 000481 AAAGAGTTCC CTTTCTCTAC GTCCTCACCA GCATTTGTTG TTTTCTGTCT TTTTTATAAT AG |
Predicted Small Protein
Name | NONHSAT113903_smProtein_341:433 |
Length | 31 |
Molecular weight | 3603.1503 |
Aromaticity | 0.166666666667 |
Instability index | 47.7133333333 |
Isoelectric point | 5.42572021484 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0379614909027 |
Amino acid sequence | MQWNVDSFLLCWEHSESSPLAILKYKINFC |
Secondary structure | LLLLLLLLEELLLLLLLLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |