NONHSAT113912
Revision as of 01:57, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113912 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
588 nt |
Genomic location |
chr6+:88317391..88319249 |
Exon number |
2 |
Exons |
88317391..88317542,88318814..88319249 |
Genome context |
|
Sequence |
000001 ATATGAAACA TTTTTTGCAA AAGTTGATCT CACAGTTGAT GGACTGCTGT GTAGATATAA AATCCAAAGA GGAGGAAAGT 000080
000081 GTTCACGTCA CCCAAAGAAA GACACATTAT TCAATGGATT CACTTTCCAG TTGGTATATG ACTGTCACAC AGAAGACGGA 000160 000161 CCCAAAAATG CTAAGCAAAA AAAGGACTAC TTCTAGCCAA TGGCAGTCTC CTCCTGTTGT CGTTATCTTG AAGGATATGG 000240 000241 AAAGCTTTGC CACAAAAGTA CTACAAGACT TCATAATTAT CAGCAGGTAG ATGGTGTATT ACCTGGCTTT TATGAAAAAC 000320 000321 TCCCTTTTTA AGAAAATACT ACTTTTAACT TGAAAAGTAT AATCTTCATT TTAATACCAA CTGGATAAAA ATCAAAGTAT 000400 000401 TCAAATTCTT TATAATTGAA TATTCAAAGA CTTCCTATCA GATTTTCCAT TTGCTTTTTG AGCCAAGAAT GAGAATCAAA 000480 000481 GGCACATTTA GCCAGTTTTA AATTGACATG GTAAGATAGT ATTAAATATG GTTTTTCTCA CCAAGATTGA CTGTCTCTTA 000560 000561 CTCACCCATT AAATAGATAA ACTACTCC |
Predicted Small Protein
Name | NONHSAT113912_smProtein_2:289 |
Length | 96 |
Molecular weight | 11112.8762 |
Aromaticity | 0.0736842105263 |
Instability index | 61.8 |
Isoelectric point | 9.19976806641 |
Runs | 16 |
Runs residual | 0.0393700787402 |
Runs probability | 0.0457957957958 |
Amino acid sequence | MKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYSMDSLSSWYMTVTQKTDPKMLSKK RTTSSQWQSPPVVVILKDMESFATKVLQDFIIISR |
Secondary structure | LHHHHHHHHHHHHHLLEELLLLLLLEEEEEELLEEEELLLLLEEEEEEEELLLLLLLLLL LLLLLLLLLLLEEEEEELLHHHHHHHHHHEEEEEL |
PRMN | - |
PiMo | - |