NONHSAT113980

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT113980

Source

NONCODE4.0

Same with

,

Classification

sense

Length

436 nt

Genomic location

chr6-:90798773..90927964

Exon number

3

Exons

90798773..90798828,90916288..90916400,90927698..90927964

Genome context

Sequence
000001 CCAAACAAAG ACCACACTGT TGACAGCGTT GGGTTCCAGT AGCGGTAAAC TACCAAGGGG CTGGTTTACA GAAAATGAGT 000080
000081 TTGCTCTGTG ATGTCATACA AGTTTGCTTT GTCCTGACGC CAACATGACA CTGAGGCAGC AGAGGAGGGA GAACAGGAAA 000160
000161 ATTGGAACCG TACTCTTAGT TAATGGTTTC CAGAGATTAT TTAGCAGGAC TTGAACAGAG GGAGGAAAAT ATTGTGAAGG 000240
000241 ATTGCTGCGA GGTGTACCAT AATTGCGTGC AGCTGTCTGC TTCAGAAAGT GAGGGCTCCA GGAATGAGGA GAATCTTCAA 000320
000321 GAACTTCCTC GCACTGTGAC ATGTCTGATC CCTTGCTCCC ATCCCTGCAG CATGAACAAG GTGGACACTC ACTGACCTGT 000400
000401 CACAAGGTTG CCCCACAAAA CTTTGGGGTC CATGTC
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Predicted Small Protein

Name NONHSAT113980_smProtein_182:394
Length 71
Molecular weight 7940.8088
Aromaticity 0.0285714285714
Instability index 50.1957142857
Isoelectric point 4.81597900391
Runs 11
Runs residual 0.0123055162659
Runs probability 0.0260795554913
Amino acid sequence MVSRDYLAGLEQREENIVKDCCEVYHNCVQLSASESEGSRNEENLQELPRTVTCLIPCSH
PCSMNKVDTH
Secondary structure LLLHHHHLLHHHHHHHHHHHHHHHHLLEEEEEELLLLLLLLHHHHHHLLLEEEEEELLLL
LLLLLLLLLL
PRMN -
PiMo -