NONHSAT114609
Revision as of 02:00, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT114609 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1166 nt |
Genomic location |
chr6-:114670647..114671812 |
Exon number |
1 |
Exons |
114670647..114671812 |
Genome context |
|
Sequence |
000001 GAAACCACTT ACTGTAATGG TTTGTGGGTG ATACCCAATG CCATCCAGGA AGAGTTAAGA GAGTCTTACA GGAAACTGGT 000080
000081 CTTGAATTAC TACCCTGGTG AGAATCCAAA TAACAAACAG AAGTGTAAAC AGATTTCTCA AGCTTATGAA GTGCTCTCTG 000160 000161 AAGCAAAGAA AATTGAATTA TTTGAGAAAA GAGGAGAGTG GGCAATTAAA AAGGGTGAAG TGAGTGGCAG TTTTGGCTCC 000240 000241 CTCATGGACA TCGTTGATAT GTTATTTGAA GGAAGAGGAA GGATGCAGAG AGAAAAAGAG GTAAAAATAT TGTGCATCAG 000320 000321 CTCTCAGTAA CCACAGAAGA TGTATTTAAT GGTGCAACAA GAAAATTAGC TCCATAAAAT AATGTGATTT GTGGCAAGTA 000400 000401 TGTAGGCCAA GGTGGTAAGA AAGGGGCAGT AGAGTGCTGT CCCAATCACT GAAGTACTAG AATGCAAATA AGAATTCATC 000480 000481 AGATACGACC TAGAATGGCT CAAGAATTTC AGTCTGTGTG CATGGAATGC CAGAGCCATG GGGAGGAGAT CAGTCCTAAA 000560 000561 GATAGATGTA AAAGTTGCAA TGGAAGGAGG ATAGTTTGAG AGAAGAAGAT TCTACAAGTT CATGACAAAG GCGTGAAAGA 000640 000641 CGAACAGTAG ATATCTTTCA TGGTGAAGGA GATCAGGAGC CAGGAGATAT TATCATTGTT TTAGATCAGA AGGACCATAC 000720 000721 TTTCTTATTC GACCAGAAGA CCTTTTCATG TGTATGAACA TAAAACTGAT TGAAGCACTG CATGTCTTCC AAAAGCCAAT 000800 000801 ATCCACCCTT GACAACCAAA CCCCAGTCAA CACCTCTCAT CCCCCAACTC AGATTGTCAA GCATAGAGAT ATTAAGTGTG 000880 000881 CGCTAAATGA AGGCATGCCA GTTTATTGTA GATCCTATGA AAAGGATCAC CTAATCATCA AATTTAAGGC CTACTTCCGT 000960 000961 GAGAATGCCT TTCTGTCTCC TGATAAACTC TCTTTGCTGG AATAACTCCT GCCTAAGAGG TAGGAAGTAA AAGACGCTGA 001040 001041 TGAAATGGAT CAAGTACATC TGGTGGACAT TGACCGGTAT CAGCAAAGAT GGGCAATTAC AATGGAGAAG CTTAGGAGGA 001120 001121 TGATGAACAT CATACCAGTG GTGGTGTTCA GTGTCAAACC TCTTAA |
Predicted Small Protein
Name | NONHSAT114609_smProtein_461:598 |
Length | 46 |
Molecular weight | 5317.1482 |
Aromaticity | 0.0222222222222 |
Instability index | 85.7133333333 |
Isoelectric point | 8.93487548828 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0209579327227 |
Amino acid sequence | MQIRIHQIRPRMAQEFQSVCMECQSHGEEISPKDRCKSCNGRRIV |
Secondary structure | LEEEEELLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLELL |
PRMN | - |
PiMo | - |