NONHSAT115266
Revision as of 02:03, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115266 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
4995 nt |
Genomic location |
chr6+:140296929..140415974 |
Exon number |
11 |
Exons |
140296929..140297930,140298266..140299576,140299758..140300010,140300699..140300733,140312129..140312236,140388571..140389212,140400633..140400735,140404365..140404394,140407818..140407898,140413888..140414873,140415531..140415974 |
Genome context |
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Sequence |
000001 GATTTTAATG CTGAGAAAGT GAAACTATGC TCGctcttgt catcttcttc cctctctctt cctttgacct tcccccttcg 000080
000081 cctccccttc cctcctagtg ctctgctcct tcccatttcc tttcctACCT CAAATCCCAT TACCCACCGC CATACCTTTT 000160 000161 TTCCTTCTTT CTCTGACTCT GATTTTTCCC AGTTCTCTCT TAATGAGGTT TATTTGTGAG CCTCAAGCCT CATATTATTG 000240 000241 TTCAGTCTTT GGGTATCCTC CATGCTGGGG GCTCCTTCCT GGGCCCATGA AAGATGAGTT TAGGGTCTGA AAGAAGGATC 000320 000321 TTTCTTCTTG CCCTCAAGTC ACTTCTGTAG CCTGTTGTGG TTTGCATGCT AGATGCATCT GGACTACATG GAAAAGATTT 000400 000401 CCTAGAAGTG Tctatggact gactgtgtta ctcccaaatt catatgttga agtcctaatc cccatcttga tggtatttgg 000480 000481 aggtggggcc tttgggaggt agttaggctt agatgagatc atgaggttgg ggactacgtg atgggattaa tgtctttcaa 000560 000561 aggaaatgaa gaaacacagg agctttctct ctctccatgc tcaggtactg aggaaagatc atatgagcac acagcaaaaa 000640 000641 ggtaactatc tatcaggtag gaagaatgcc ctcaccaaga accatatcgg ccagtacctt gatcttagac ttcccagcct 000720 000721 ccagaactgt gagaaaataa atgtctgttg ttgaagccac cacatccatg gtattttgtt gtagcagccc aaactgacta 000800 000801 agacaAAGTA TCTTCTTTTC AAAGATTGGA CTTTATATTT TTTACTTGTG TTAGTATTTC ATAATCCCAA AGTTCTACAA 000880 000881 CTTCCATATA ACAAAAATTT TGAATTCAGT ACAATGACCT TGTAAGTATT TCATTTATAA CAAGCCTCTT TAAAATATAT 000960 000961 TTAGTAACAT TGCTTTAATT AGAAAGAATT TAAAATATAC GActggcTGT TGTTGTTTTT AGTCATGAAA TATTCAACTT 001040 001041 TGTCCAGCCA TCCTGGGCTA CTCTAACAAC TGTAATTGCT TTATAACTAC TTAGCTATGG ATTTCTGGAA TCTGAAATTG 001120 001121 AGGCCATAAG CAGAAATGAC TAAAATATAG AATTCTTTCT CCTATCTTTA TTTGTTCATC TAGATATTGG AACTGTATCA 001200 001201 TTAAATTTAA AGGGGGGAAC TAGTATTGAC AACAAATTAA ATTATTTCAA CCAAAACCAC TTAATAGGTA TGTTGACTGT 001280 001281 TAGTCATTAC CAAATCAGCT AAGAAAAAAT AGTTTTATTT CCACTTTGTT GATTCAACAA ATAATTTTCA TATTTGTAAT 001360 001361 TCATATTGAC AGTCACAGAT TCCTAGGATC TCTATTAACA GATACCTCGT TTGTGCCTGT GATTATTTCT TCATCTGTGc 001440 001441 ctgtctttgc cctttcctag ctgaatgtcc ttgaaaaaat catttggcct ttttgtgtct gtttcctcat catgaggtgg 001520 001521 aaaaatacat agagtcaaat gtgtgaggtt gtttccagaa attaatttaa gtaagcactt tgaatactac cagaccatag 001600 001601 taagttctAT GATGATGACG ACAGATCCAG TTGAGAGCTC ATTTGCTGGC AGCATCCTAA ATAACTCTGC TTCATGGAAG 001680 001681 AAAGGCTCTG TAAATACCAA AGATTAAGAT CCTTGGTTTA AGACTCAAGG AATCTGTTTA CAAGGTAAGT AAGCAAGAGA 001760 001761 ACAAAAACAA AACATAGTTT ATACAAGGCC CATTCAATCA CAATCTTATC TTTTCAATTT CAAGTCTATC CCCTTTAAGT 001840 001841 TTCCATGACA TAAATATCAG CTGACATACA CACAAGGTGA CTCACCTTCT TCCCATTAAA CTAGGTTGAG ATTAAAAACA 001920 001921 AACAAGCAAA CAGCTGGAAT GTGGCACGTG GGTCAGACCC TTCTGAGTCC AGTTGGGTAA CTCAGCAGAG ATCAGAATGA 002000 002001 TCTTCAAAAA CCAACAAGCC ATTGGCACGT ATCTTCAGGC ATGCTTGAAG TCTATGGGGC CAAATGGTAG AGTATCCTGG 002080 002081 CAGAGCCAAA AAGTCTTCTT TTATGACACA GAAAAGAAAA CTTCTTTCAA AGTAGTTATG CAACCCAGGA GAACACAATG 002160 002161 CATCCACTGT GTGTGTCCTG GGGCTGTCTA TGAACACATG ATTTCATATT TTTGTCCTCT GTAAACTTCA GCATTGATGA 002240 002241 TGAACATTAT TTCAAGGAAA TATCCCACTA CTTTATCTCT GTAAAGACAT CCATAGAGAA TGTAAGTTAT AATCCTTATA 002320 002321 AAATCTTGTT AGGGAAGTAA TTTTGCTCAT TTCATACTGT TGACATTTCT GAATTTCAGT AATCATTAAT TTTTTTAAAG 002400 002401 CTGCCAGCAG ATATGTACAA TACTCCTTTT AGATATTATT CCCATCAAAG ACAGATTTCA CCTCTTTCAC TCTTTGTGTC 002480 002481 ATTTCTCTAT TATTTTGAAA ATATTACTAA TGCCTTCAAG TTCATTTGTA TTCTGTAAGA TTCTCCTTGT ATCCAAGCAA 002560 002561 CTCCATACGG GTGTGTCGGC TGCAGCCAGG CGGCAGTTCT GCCTGTTTTG GCATTTCACG TTCTGCTGCT TCATCAAGGC 002640 002641 CAGCTCCTTC ACTGCAGGCT CTTACGACAG CACATACTTC TCTTAACAGC CATGTTTTCA GTCCTCGTTT AGGGGCCTTT 002720 002721 TAGAAAATCT CACACCACTT CCTAGTTGGA GCAATTAAAC AATAGAGAAG ATGGGTATTC TGGAGCAGAA TTTAATGAAA 002800 002801 CAGAACTCCA CCATCTATGG CAAGTTTGAC TGCTTGAGTC TCCAGAGGAT AATAGTTGGA GGCCACTGAG GCCCAAATTC 002880 002881 ATCAGTCCGG CCATTGAAGG ACACAAGTGA ACAAAGGAGG ACGGCAAAGA CAGAACTGTG ATATTCAAAC ACTCAATAGC 002960 002961 TCACAGTGTC GGGGTTCATT ATGacactta ctaagcacat gccatatttc tgacactgtg ctaagagttt catgaacatt 003040 003041 aactaaatta accccataaa aacgccatta gaaagatgca gttttgtacc cccttacaca gatgaagaaa ataaagtata 003120 003121 gagactttaa gaaatttgcc agaagtctta taactggtga gtaaacttta gctacttgat cagacctcaa ccaggcgatc 003200 003201 agaacccaga acccatacgg ctcaaccaat aCTTTAATCT ACTTCTCAAA GTCTAAGGTA AGTACGCAGG ACCAAGCCAG 003280 003281 AAAGCCAGGA TACGAGGCAG AGGGCTAGAA GACCAGGTTT TCCTAAAGCA TCAGAGTTTT GTTGTTGttt gAATTTTCTG 003360 003361 CTGCCACCAT TCAGCAGCAG CTAGGCTATG CCTCTCATGA TCATGACACG TAGTGGAAAT TTTCCTGGCT TCTATACATC 003440 003441 ATCATCTCTG CCTGTGTGAG TCAATCTGTC AGCACAAGTA CAAGGATTGG TTTGCCATGG CTCTTTGAAA cagttactct 003520 003521 tgtcctcatt gtagagatgg cgatactaag gcagaatatg gtaagacagt tttgttggtt ggatatttgg ggctcagtgg 003600 003601 ggatggcttg tctctactcc atgtgatgtc agctggggtg acttgattag ggctaagaga tcaaagattg cttcattctc 003680 003681 aataaatgga gctttgctgt tactgtcaaa ctggggcaat gtggttctct tccatgtggc ttcactctcc atatggtagt 003760 003761 tcattcacta tgatctttct ctccacatgt tctctgtctc cgcaggctag cctggacttc tttttgtgga gactggattc 003840 003841 caagattgaa agtagaagct acatgttttc tccaagcagg gctttcagac ttcacttctg caacatttta ttgatgaaag 003920 003921 caagtcacaa gaccagactg attcaagggg tggagaaata gaccctactt cttgatggag ggaggagtag agttacattg 004000 004001 caaagggatc tggacaaaaa aaggagtgat ttattaggaa tcatgtttaa caatttacca caatccccag cgcaactgcc 004080 004081 tgttagctgg atccagaaat gtctacgact actgcaatgc cacttggcct taggggtgat gtgacccagt gtaaagagat 004160 004161 ggtggtctta accaatcaca gttaagatag tttagttttg gaaggtataa aaaatatgta acaacatgaa tgcactttta 004240 004241 gggtcagaca agagacttgg aaagagcctg caaaatggag gagccctgag gcctaagtct catgagtgtc aATGCTTACC 004320 004321 TGTATCTAGA CACTGGCATC CCCCTTTTGA TAAGGCCAAG Attgattgtt ttccttttct acctacccta tatctaatcc 004400 004401 atgtacaaac actgttgaca cacaaaagaa ccctaaattc aacaatctgt gaagaatttt tgcactaaca tgttagttca 004480 004481 aaaactcaac attgcttgct aagactattg caataaactc ctctatgatc ccctaatttg attcttgctc cCCCTTGGCA 004560 004561 TACCATGCTG GAACATGTGG TCATTCATGG TAGGGAGCAT TTAGGCAAGA TTTCTACATC AACCCCACTG TTATCTCTCC 004640 004641 AGAGTTGAAG CTATGAGACA ATTCAAAAAT AATATGGTAG TCAATTCTGT TTACTCAGAC AGCTCTCACT CACAAACGGA 004720 004721 TGATGAGTGA CTTTTTATTA AGTTCCAGAA AAGAAATCAC AGACTATCTT TTAAGAAGTC AGAGTCTCTT TTTTACCTGC 004800 004801 TGATGAGGCA CAGGACATGG AAATACATCC TCGGCATCCA ATAACGACAG ACCTTCCAGA TCTTATTGTG CTGGGCACCA 004880 004881 CATGGTTAAG CTTTTTACTG TGTTAATTTG GTTTTGCGAA GGCCATTTAT AAATAGAGTT ATGAGGAGAT GTATGGAAGA 004960 004961 AAGGAGAGAA GAGTGGGAAC AAAGCAAAGC TAACG |