NONHSAT115547
Revision as of 02:04, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT115547 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
599 nt |
Genomic location |
chr6+:151256104..151256702 |
Exon number |
1 |
Exons |
151256104..151256702 |
Genome context |
|
Sequence |
000001 ATGGGGAATG GGCTATCAGA CCAGACTTCT ATCCTGTCCA ACCTGCCTTC ATTCAGTCCT TCCACATTGT TATTCTGGGT 000080
000081 TTGGACTGTG CTGGAAAGAC AACTGTCTTA TACAGGCTGC AGTTCAATGA ATTTGTAAAT ACCATACCTA CCAAAGGATT 000160 000161 TAACACTGAG AAAATTAAGG TAAGCTTGGG AAATTCTAAA ACAGTCACTT TTCACTTCTG GGATGTAGGT GGTCAGGAGA 000240 000241 AATTAAGGCC ACTGTGGAAG TCATATACCA GATGCACAGA TGGCATTGTA TTTGTTGTGG ACTCTGTTGA TGTCGAAAGG 000320 000321 ATGGAAGAAG CCAAAACTGA ACTTCACAAA ATAACTAGGA TATCAGAAAA TCAAGGAGTC CCTGTACTTA TAGTTGCTAA 000400 000401 CAAACAAGAC TTGAGGAACT CATTGTCTCT TTCAGAAATT GAGAAATTGT TAGCAATGGG TGAACTGAGC TCATCAGCTC 000480 000481 CTTGGCATTT GTAGCCTACC TGTGCAATCA TAGGAGATGG CCTAAAGGAA GGACTTGAGA AACTACATGA TATGATCATT 000560 000561 AAAAGAAAAA TTTTGCGGCA ACAGAAAAAG AAAAGATGA |
Predicted Small Protein
Name | NONHSAT115547_smProtein_320:493 |
Length | 58 |
Molecular weight | 6356.2433 |
Aromaticity | 0.0175438596491 |
Instability index | 71.5771929825 |
Isoelectric point | 5.54058837891 |
Runs | 10 |
Runs residual | 0.0214912280702 |
Runs probability | 0.048595654478 |
Amino acid sequence | MEEAKTELHKITRISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSAPWHL |
Secondary structure | LHHHHHHHHHHHEELLLLLLEEEEEELLHHHHLLLLHHHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |