NONHSAT116307

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT116307

Source

NONCODE4.0

Same with

,

Classification

sense

Length

541 nt

Genomic location

chr6_apd_hap1-:175652..178762

Exon number

2

Exons

175652..175843,178414..178762

Genome context

Sequence
000001 GAACCGCGTT TCCCTCTGCA GAATCAGCTG ACTCACTGGA AGGTGGAATT CTTGATCTTG GCTCAGTTTT ATCCCATATT 000080
000081 CTACCAGTCT CAGGCATGTG GTTATCCCTG TACTTAAGAT TCCCAATCCC TCTCCCCTTA AAGCTTTTGG TTGGATGATA 000160
000161 GAGCCATACA TCATATGAAA AAATTAGTGC ATGACTAACA ACAGAGGTTC TGGGGTTTCT GGTGGAGACC ACTGCTTTAT 000240
000241 GATGACTAAC CAAAGCCCCC TTAGTTATGT ATTTCCTGGA AACCCTCATG ACTTCCATAA CTTTGCTCTT TTATTCTTTC 000320
000321 AGAATTAAGA GAGGCTCAGT TATACTCAGT GGACGTGACT CTGGACCCAG ACACGGCCTA CCCCAGCCTG ATCCTCTCTG 000400
000401 ATAATCTGCG GCAAGTGCGG TACAGTTACC TCCAACAGGA CCTGCCTGAC AACCCCGAGA GGTTCAATCT GTTTCCCTGT 000480
000481 GTCTTGGGCT CTCCATGCTT CATCGCCGGG AGACATTATT GGGAGGTAGA GGTGGGAGAT A
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Predicted Small Protein

Name NONHSAT116307_smProtein_266:400
Length 45
Molecular weight 5011.8187
Aromaticity 0.113636363636
Instability index 45.9388636364
Isoelectric point 9.68780517578
Runs 6
Runs residual 0.0267379679144
Runs probability 0.0363304480952
Amino acid sequence MYFLETLMTSITLLFYSFRIKRGSVILSGRDSGPRHGLPQPDPL
Secondary structure LLHHHHHHHHHHHHHEEEEEELLEEEEEELLLLLLLLLLLLLLL
PRMN -
PiMo -