NONHSAT116619
Revision as of 02:09, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT116619 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
851 nt |
Genomic location |
chr6_cox_hap2+:1996095..1999049 |
Exon number |
2 |
Exons |
1996095..1996440,1998545..1999049 |
Genome context |
|
Sequence |
000001 AGAACGACCG AGTTTCTCTC AGCCGAGAAC TGTGGCTGCC CCTCCGGTGA AAACAGAGGA AGTGGGAGCG GCAGGAAGCG 000080
000081 CTTTGGGACC AGGGCGACCC CTGAAGCGTA GAGGAACCAG GTCACAAGCA TACGTGAATG CTCACATTCC ATAGTTATCA 000160 000161 AATGTATTCA GGTTTAAATT TTACTTTTCT AGAAAAAATG TAAATAATCC GTTGAGAATA TTTAATGAAA AATGTTGGTC 000240 000241 GTATCTTTAT CTGGTCTGCG GCTCTGTCCC TGTTTCCTGG ATAGGAGACT ACGTCTGTAT CTTGTATCAC AGGAGGCACC 000320 000321 TTCTTCCTGT TTCCTGGCAC AGACTTtaaa tcttagtgct cctcactctt tgcgtctacg ctgcttttat gaactgttaa 000400 000401 cactcactgt gaaggtctgc agcttcactc cttaagccag cgagaccaca aacccactgg gagggataaa caactccaga 000480 000481 cgggaggaac aaacaacttc gggtgcacca cctttatgaa ctgtagcact cactgcgaag gtctgcagct tcactcctga 000560 000561 ggccagcaag accacgaacc caccagaagg aacgaacaac tccagatatg ccacctttaa gggctataac actcaccgcg 000640 000641 gaagtctgca gcttcactcc tgaagtcagt gagaccatga acccaccaga aggaagaaac tctggacaca tctgaacatc 000720 000721 tgaaggaaca aactctggac acaccatctt taagaactgt aacactcacc gcgagggtac acggcttcat tcttgaagtc 000800 000801 agcgagacta agaacccaac aattccggac acagcatgat cttggttcac t |
Predicted Small Protein
Name | NONHSAT116619_smProtein_137:202 |
Length | 22 |
Molecular weight | 2589.015 |
Aromaticity | 0.238095238095 |
Instability index | 40.919047619 |
Isoelectric point | 6.50079345703 |
Runs | 6 |
Runs residual | 0.0394557823129 |
Runs probability | 0.0183124300771 |
Amino acid sequence | MLTFHSYQMYSGLNFTFLEKM |
Secondary structure | LLLEEHHHHHHLLLHHHHHHL |
PRMN | - |
PiMo | - |