NONHSAT133422

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT133422

Source

NONCODE4.0

Same with

,

Classification

sense

Length

517 nt

Genomic location

chr9-:99001609..99006632

Exon number

3

Exons

99001609..99001953,99003040..99003189,99006611..99006632

Genome context

Sequence
000001 AGCAAAAGAA GTCATCATCC AGGTGCTGAC CCCATATGCT GTCTCGACTG CAATGACAAA GTATCTAAAT ACAAATGTGA 000080
000081 TAACCAAGAC TGCTGATGAG TTTGTCAAAG AGTCATTGAA TTATGTCACA ATTGGAGGTG AAACCTGTGG CTGCCTTGCC 000160
000161 CATGAAATCT TGGAATTGGA TCTCTCTCTG TCTTTCATGG ATGGTAGAAG GATTCATGGC TCCATGCGCT AAAGTCTACC 000240
000241 AAAGCATTCC TTTATCTGCT GGGACTTAAA GACTCTGGCA AGAGATATTG AACTTTCTCA ATTACTTGCT ATTTTTATGT 000320
000321 AGAACCTCAA CAATGTGCAT AAtcaccaat gtaactcaca ctacaaagca gacatgcaga gaggatataa agtctttatt 000400
000401 ttttctgttg ctgatctggt ctttttccag atcaccactt gctgcaggaa aattcatcga atgtccaatg agtctaaact 000480
000481 gagtttgatc tagtcatctc aactggccat ttaggaa
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Predicted Small Protein

Name NONHSAT133422_smProtein_332:481
Length 50
Molecular weight 5606.6266
Aromaticity 0.102040816327
Instability index 59.906122449
Isoelectric point 8.63262939453
Runs 9
Runs residual 0.0216216216216
Runs probability 0.0275864099394
Amino acid sequence MCIITNVTHTTKQTCREDIKSLFFLLLIWSFSRSPLAAGKFIECPMSLN
Secondary structure LEEEEELLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHLLLEEELLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooo