NONHSAT133430

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT133430

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2406 nt

Genomic location

chr9+:99262637..99266837

Exon number

2

Exons

99262637..99264842,99266638..99266837

Genome context

Sequence
000001 AAAAAATCAA GACAATGATT GATCAATACT GATCAGTTAC ATTTTAAAAC TTTTAATAAT CTGTACATGA GTGCAGGTTA 000080
000081 GATAAAAGTC TGCAAATTAT TAATAGAAAA CTGCAGTACT ATCATCGGAT GAACATGTCT GCTGACAATT CTACCAGGTA 000160
000161 ATTAAGGAGG TAATTTCCTA CACAGTATAG GTGAATTGTC CAGTCTTTAA ACACATCTGG AGTCATCTCC ACTGAGTGAC 000240
000241 ATGGAGAATA ACCTGATGTG GGTAAATGGA AGAGCAGCAG ATAGCCTCTC CAGGGCAGTT TCAGCGGGAG AGAACATTTA 000320
000321 AAGGAACAAT AAAATAGGTT TTAAAAGTTG CTTTTGATGA GCACTGCTTT CCAAAATGCA ATAATGATTT TTTTTAATGT 000400
000401 AGAAAGAGAA GCTGTGTTAA GAACAGACAT CCAATGAGTG CACTGCTTCT GTGGCTCCAA AGGTGACTGG GAAAAGAGAA 000480
000481 GGCCCCAGGA GAGCCCTCAG GCCACACACA AGCCCAGGCC ATCCCGCCCA GCCCAGCGAG CACACTGGCC TCATAACAAT 000560
000561 GCTTGGGAAC TCCTCTAAAA CTTGCCTAGG CCCAAGAAAA CAGAGAGGTA GCAATCACCC CTGTGAGAGG GCTAGAGAGG 000640
000641 AGGGGAGGAA GTAGGTAGGG GACAGGCTAG GGGCATCAAG CTCAGAACAG GGGAATTCTG GAGGCCGCAG AGCTGCGTGC 000720
000721 TGCCGGGAAG CACTGGCCAC GCCAGGCCAT TCTGCTCTCA CGAGGCGCTG CTCCTCACCA AATTCTACAA AAAGCTAAGT 000800
000801 CCGTCTATAC TTCTAGGAAC CCAGTTTTGC AGACGCTCTT CCTCCGGACT GTCCCTGACT TTTGATAATT TTGAGTCCCC 000880
000881 AGAAAGCTTC AAGAGCACCT AAAAATATTC ACTTCCAATT TTAATTCCAT CGCAAACCGT CCCAGTGTAC TTTCAGGGCT 000960
000961 ATTTAAGGCT CTTAGGTTAA GGGGATCTCT CCATCTGACA CACAGTTTCA TGTTCCATAG CAACAAGGTC TTCTATAACA 001040
001041 ACGACTCTAA GTCAGAATTC CAGAAGATTC TGGTTGTTTG TGGTTTCAGT TGGGGGTGAG GGGAAGAGTC CACTCTCATT 001120
001121 CATAGCAGGA AGAACTTTCC ATCCCTCAGA CCCAGAGACT TCCTGGATGC TAGAGACAGT CCTCATAAGT GTAACACTGC 001200
001201 CCTTGCTATG CACACCATCC CAAGTCATTT GGTTATTACA AGGAATGCCT CTTCACCAAA TCACAAGTTT TCTATGACTA 001280
001281 ATTTCAGTGA ACCAGTTAAA TAGAAAGATT TTTAGAAAGA GCCACAGTGA TAGCAATTCT AGGTGGAAAC TTGAGCAGGC 001360
001361 AACATGAAGA GGCAGTTTAT AAAATGAAAA AGGGCTGTGG TTCCAGTGAC ACCCTTTCTT TTCTTGGACG AAACACCAGG 001440
001441 AGGCTCATTC ACCGTGAGGG AGACAGTACT CACAAGAGCT GTGGCGCCTA CGTTTACTTG TTCTGATGGG ATGAAAAGCC 001520
001521 AAACTAAGAA GGGATCAGAT AGAAGCACGA TTTTCACAAC TACCTGGATT ATTATTAATG GAGGGGATGG CCTTAAAAGG 001600
001601 GGTAAGGGGA AGAAGAGGTG CCCTGAGAAT TCAATGCTTT ATGCATGGCA CAGTTTGAAT ATTTATATTG TCTCAGCTCA 001680
001681 AAATAGCAAA AGGAATGTTC CTCCTCCCAC CCAAATCTTA TTGAAGAGTA GTCTGCCCAC AGCCAAGTGG GTCTTTGTGC 001760
001761 CTATTCATTT CCAGGGACAG AAAACCACTG TTTTTCTGTG ATCCAGTCCC CAGTGTTTAA AAGCTGGCCT GACCCCACCC 001840
001841 GACAGTGCCT GGCGGGGAAA GAGTTGCTTG TTTGGCTGAG AACACGGCAT CTTCCGTCTC TCATGATGCC GGTCAATTTT 001920
001921 ATACTTTCTT CCAAGAAAGT ACACCAAAAT GGAGGCACTG CCTTTCAATT ACTTTTTGCA TTAAAGACTT TTAACTTGTT 002000
002001 TATTCCAACC GCTTTTATTT CTTCCAGTTT TGTGAAAAAG GCAGCTTCTT AAAATGGAGT TGCCTACTAA TCTGGCGCAC 002080
002081 GCCTTGTGGC TTAGGAGGGC ATTTGTTTCC CACTGCCTGT CGACATCTCA GCCCTCCATG CTCCCGGCAC AGGCAAAAAT 002160
002161 GGCTTAACAA TCATTAAACC ACCCACTTCT TATGGAAGGA ACTGAGTTCA CGACGCTACA CTTTCAGGTC AGTAACAACT 002240
002241 TTCAGAAAGC AAACAAAACC AAAATAAGAG TCAGAAAAAC CACTTCCAAT CTGGAGGGCT CCTCGCCCGA TGCTGCTGCT 002320
002321 GCTGCGCTCT TCAAGGAGAA GCGTTTGAAT CGATCATTTC GTTTTCAGAG ATCCCAACAG AGCACTGAGT CAAAGATCCA 002400
002401 GACCAG
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Predicted Small Protein

Name NONHSAT133430_smProtein_1166:1276
Length 37
Molecular weight 4036.9034
Aromaticity 0.0555555555556
Instability index 55.0638888889
Isoelectric point 5.22235107422
Runs 7
Runs residual 0.013986013986
Runs probability 0.0443132207839
Amino acid sequence MLETVLISVTLPLLCTPSQVIWLLQGMPLHQITSFL
Secondary structure LEEEEEEEELLLLLLLLHHHHHHHHLLLHHHHHLLL
PRMN -
PiMo -