NONHSAT133459
Revision as of 02:31, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133459 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
577 nt |
Genomic location |
chr9-:99799573..99801424 |
Exon number |
5 |
Exons |
99799573..99799680,99799775..99799897,99800200..99800335,99800693..99800830,99801353..99801424 |
Genome context |
|
Sequence |
000001 ACCAGACCGC GGACGTCTGT AATCTCAGAG GCTTGTTTGC TGAGGGTGCC TGCGCAGCTG CGACGGCTGC TGTGTCTCCT 000080
000081 GGAAAGGGAT TCCCGAAAGG TTTTATTCCA AAAGGAGAGG TTGGAAGACA TAGCTCATCT CCTGCTGTGT ATCAGCCAAG 000160 000161 AAGGTGTGAG GTGGTGTTCC TTGGGGATCC GCTTGCATCT ACTTGGGATG GTTTTGAAAC ATGAATCTTT CGCTCGTCCT 000240 000241 GGCTGCCTTT TGCTTGGGAA TAGCCTCCGC TGTTCCAAAA TTTGACCAAA ATTTGGATAC AAAGTGGTAC CAGTGGAAGG 000320 000321 CAACACACAG AAGATTATAT GGCGCGAATG AAGAAGGATG GAGGAGAGCA GTGTGGGAAA AGAATATGAA AATGATTGAA 000400 000401 CTGCACAATG GGGAATACAG CCAAGGGAAA CATGGCTTCA CAATGGCCAT GAATGCTTTT GGTGACATGA CCAATGAAGA 000480 000481 ATTCAGGCAG ATGATGGGTT GCTTTCGAAA CCAGAAATTC AGGAAGGGGA AAGTGTTCCG TGAGCCTCTG TTTCTTGATC 000560 000561 TTCCCAAATC TGTGGAT |
Predicted Small Protein
Name | NONHSAT133459_smProtein_338:388 |
Length | 17 |
Molecular weight | 1808.1585 |
Aromaticity | 0.0 |
Instability index | 42.48125 |
Isoelectric point | 9.78204345703 |
Runs | 5 |
Runs residual | 0.0104166666667 |
Runs probability | 0.0231937820174 |
Amino acid sequence | MARMKKDGGEQCGKRI |
Secondary structure | LLLEELLLHHHLLLLL |
PRMN | - |
PiMo | - |