NONHSAT133738
Revision as of 02:31, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133738 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
864 nt |
Genomic location |
chr9+:104231632..104244328 |
Exon number |
3 |
Exons |
104231632..104231727,104242122..104242205,104243645..104244328 |
Genome context |
|
Sequence |
000001 AGGAGACCAG ATCCAACTCG CAATCAGCTA TAGTGAAGTT ATGATATGAG AAGCACCAAC TTGGCACAAG ACTTGGGAAA 000080
000081 GGCAATGAGG CAGCAGATCA AGCTGCAGAG GAAACAGCCA CCTGGGGCGT GTTCTTACGT TGCCTGGAAG CTGCACAAGA 000160 000161 GGCCAAGTCA AAACATGCAG AATTCCAGTT GCCCATGATG TCACAGGCTG AGGCCCACAC TCCAGAGACA CTGTGGACTG 000240 000241 ACTGGCACCT ATGAGCTGAC CTAATAACAG TTACACCATT ACAGCTCCGA TTCTACAGAA CAATACATAT CCAGTTCTTA 000320 000321 TCTATGCTTT GCATGTGCTC TTTGAAACAC AACCCTTCCC TAAACAGAAT TCTCTACCTG TTACCATATC TAGAGTGTAG 000400 000401 GGCTCAGGGA AGACAGTAAA GGACACAGAC TCTGAGAAAT GAACATGAAC TAGGGCTTAG ATGAATAAAT GGAGCTACAA 000480 000481 CAATAGTTAT ATTTTAGTGC AACTTCTGAA AATTAAACTA AAGGATCCAC GGGTGTGGAA GACACAATAC CAGGGTGTGA 000560 000561 GTCAGGGGAT GAGTGCTCAA GAATGTTCTG TGTTTCCCAA ATCCACTATA TGAATGGCAC GACCACTTTC CCAGGCAACT 000640 000641 CAGTCTAAAA CACTAGTTAG TTCTAACTTC TCACCTCCAC GCAGTCACTT CCTAATCCCA CCTCTACGGC CTCTTTTATT 000720 000721 ATGCCTCTCT TTTCCCCTCG CCTTCCCCTT GTCAAGCTTT CCTCCCTGCC ACACTCTAGT TCCTCCTCAG CACCTCCAAG 000800 000801 CCAGCTGATT GCAACAGGCT Cctaacagag cttctgacct ccagaatgag caacacaagc caaa |
Predicted Small Protein
Name | NONHSAT133738_smProtein_323:418 |
Length | 32 |
Molecular weight | 3665.4037 |
Aromaticity | 0.0645161290323 |
Instability index | 63.1903225806 |
Isoelectric point | 9.09893798828 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0484720014131 |
Amino acid sequence | MLCMCSLKHNPSLNRILYLLPYLECRAQGRQ |
Secondary structure | LEEEELLLLLLLHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |