NONHSAT133738

From LncRNAWiki
Revision as of 02:31, 17 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT133738

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

864 nt

Genomic location

chr9+:104231632..104244328

Exon number

3

Exons

104231632..104231727,104242122..104242205,104243645..104244328

Genome context

Sequence
000001 AGGAGACCAG ATCCAACTCG CAATCAGCTA TAGTGAAGTT ATGATATGAG AAGCACCAAC TTGGCACAAG ACTTGGGAAA 000080
000081 GGCAATGAGG CAGCAGATCA AGCTGCAGAG GAAACAGCCA CCTGGGGCGT GTTCTTACGT TGCCTGGAAG CTGCACAAGA 000160
000161 GGCCAAGTCA AAACATGCAG AATTCCAGTT GCCCATGATG TCACAGGCTG AGGCCCACAC TCCAGAGACA CTGTGGACTG 000240
000241 ACTGGCACCT ATGAGCTGAC CTAATAACAG TTACACCATT ACAGCTCCGA TTCTACAGAA CAATACATAT CCAGTTCTTA 000320
000321 TCTATGCTTT GCATGTGCTC TTTGAAACAC AACCCTTCCC TAAACAGAAT TCTCTACCTG TTACCATATC TAGAGTGTAG 000400
000401 GGCTCAGGGA AGACAGTAAA GGACACAGAC TCTGAGAAAT GAACATGAAC TAGGGCTTAG ATGAATAAAT GGAGCTACAA 000480
000481 CAATAGTTAT ATTTTAGTGC AACTTCTGAA AATTAAACTA AAGGATCCAC GGGTGTGGAA GACACAATAC CAGGGTGTGA 000560
000561 GTCAGGGGAT GAGTGCTCAA GAATGTTCTG TGTTTCCCAA ATCCACTATA TGAATGGCAC GACCACTTTC CCAGGCAACT 000640
000641 CAGTCTAAAA CACTAGTTAG TTCTAACTTC TCACCTCCAC GCAGTCACTT CCTAATCCCA CCTCTACGGC CTCTTTTATT 000720
000721 ATGCCTCTCT TTTCCCCTCG CCTTCCCCTT GTCAAGCTTT CCTCCCTGCC ACACTCTAGT TCCTCCTCAG CACCTCCAAG 000800
000801 CCAGCTGATT GCAACAGGCT Cctaacagag cttctgacct ccagaatgag caacacaagc caaa
[back to top]

Predicted Small Protein

Name NONHSAT133738_smProtein_323:418
Length 32
Molecular weight 3665.4037
Aromaticity 0.0645161290323
Instability index 63.1903225806
Isoelectric point 9.09893798828
Runs 5
Runs residual 0.0399865591398
Runs probability 0.0484720014131
Amino acid sequence MLCMCSLKHNPSLNRILYLLPYLECRAQGRQ
Secondary structure LEEEELLLLLLLHHHHHHHHHHHHHHHLLLL
PRMN -
PiMo -