NONHSAT133799

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT133799

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1148 nt

Genomic location

chr9+:107515880..107521411

Exon number

2

Exons

107515880..107516981,107521366..107521411

Genome context

Sequence
000001 TTAAGATTTG TCTTCTTGCT GATTTCACTT CTTGCTGACT TAAAGAAACT ATTACCTCAA TCCAGTTTTA AATAAAGGTC 000080
000081 AGATTAGAAA AGCATAAACT TATTTAAATG TTATTTTACT TCCCCCATTA TTCCCAACTT TGTAGTGTAT TTAGGTTACA 000160
000161 AAAAATTTAC AAAGTCTTCC TTGGATCTTT ACCTACTTAG GTGTCCCCTC AGCTCTCAGC ACTATCTAAA TAAAATAGTT 000240
000241 CACTTCTCTG ACAGTGTCAA ATCTTGGTTC TCCTCCTCTG TGTACATCAC TGCTTGGAAA TTTTTACATG CTTTTCCTAC 000320
000321 TTGTCCCAGA GTTTCTTTCT CTCCACCAGC CCTATACTTC TGTCCAAAGT GTACAATACT TTTCAAGTAT TTACCTGGAT 000400
000401 ATTTAGGAAA AATAAAACCA TCTCTTTAGG TTTGTCTTTT TTCCTCCAAA ATTCAAAGAT ATCACTTCAG GTCCACTCTT 000480
000481 TGCTTTGCTG TTCCTGTTAA AAATGGAAAC TTATAGGGAG AAATTATATG AAGAAAAACA TAGTGGAAAT TGGAAAGAAT 000560
000561 GAAAATATAG ATTGGAAAAT TCTTCTTTTA TTCTTTTATT TTCTAAAAGC ATAGACTTTT GCAGCTCAAA ATTCTATATC 000640
000641 ATTATACATT CTCAACAGTT TTTTAACAAA TGTTATAGAT TAAAAATATT TCAGATAATA GTTATAATAG CTTCCAGTTC 000720
000721 TTTTTCTTTG TCATCTGTAT GATTAAGCAT AACAACTCAC TCTTAAACAT GGGCAAGGAC TTTCTAAGCA TAAAAGCAGA 000800
000801 GAGTGCAAAT ATAATAAACA TGTCTACATA ATATGTATGC ATGTCTGATC CTCCAAATCT GTGTGTGTAG ATAGTGAAAG 000880
000881 ACTATTCACT GAGAAACGTG ATTGGATATT GCTTGAATGT TTTCTGAAAA ATTCTTTTTC TCCCTATTCC AGGAGTCTAT 000960
000961 GAACTGGCCA CTTTTCAGAT GAAACCTGGT GGGCCAGCTC TGTGGGGTGA TGCATTTAAA AGGGCAGTTC ATGCTCATGT 001040
001041 CAATCTAGGC TACACAAAAC TAGTTGGAGT GTTCCACACA GAGTACGGAG CACTCAACAG AGTTCATGTT CTTTGGTGGA 001120
001121 ATGAGAGTGC AGATAGTCGT GCAGCTGG
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Predicted Small Protein

Name NONHSAT133799_smProtein_107:199
Length 31
Molecular weight 3627.3221
Aromaticity 0.233333333333
Instability index 59.647
Isoelectric point 9.51544189453
Runs 5
Runs residual 0.0355855855856
Runs probability 0.00429252782193
Amino acid sequence MLFYFPHYSQLCSVFRLQKIYKVFLGSLPT
Secondary structure LEEELLLLHHHHHHHHHHHHHHHHHHHLLL
PRMN -
PiMo -